DR. SHAILESH MALLA, MD

ATLANTA, GA

Research Active
Internal Medicine - Cardiovascular Disease NPI registered 21+ years 50 publications 2023 – 2026 NPI: 1437154267
MiceMice, KnockoutCell ProliferationAntineoplastic AgentsCell DifferentiationPlant DiseasesHistonesPhenotypeApoptosisStress, PhysiologicalModels, BiologicalMelioidosisMetabolic Networks and PathwaysHistone DemethylasesMouse Embryonic Stem Cells

Practice Location

275 COLLIER RD NW
ATLANTA, GA 30309-1709

Phone: (404) 605-2800

What does SHAILESH MALLA research?

Dr. Malla studies a range of topics within medicine, including how infections affect patients with HIV, the role of metabolism in immune responses, and the effectiveness of certain treatments for cancers and neurological disorders. He has researched new teaching methods for anatomy that improve engagement and understanding in medical students. His investigations often center on how specific biological processes and treatments can enhance patient outcomes, particularly in cases involving immune dysfunction, infections, and cancer.

Key findings

  • In a study of 37 patients with optic neuritis, 56.76% showed significant improvement in vision after steroid treatment.
  • Research on advanced HIV revealed that conditions like cryptococcal meningitis and toxoplasmosis can be managed even in low-resource settings.
  • In experiments, a compound called Raji 10 effectively reduced prostate cancer cell growth by over 95% at concentrations less than 5 micromolar.
  • A clinical scoring system was evaluated with 151 patients, helping accurately differentiate mycobacterial from bacterial infections in spinal infections.
  • Natural compounds from the fungus Trichoderma reduced leukemia cell viability from 94.3% to 54.35% in laboratory tests.

Frequently asked questions

Does Dr. Malla study infections related to HIV?
Yes, he examines how advanced HIV can lead to serious neurological infections and how they can be diagnosed and treated.
What types of cancer treatments has Dr. Malla researched?
He has investigated the effectiveness of novel compounds in killing prostate and colorectal cancer cells and explored natural remedies from fungi to treat leukemia.
Is Dr. Malla's work relevant for medical students?
Absolutely, his innovative teaching strategies in anatomy aim to make learning more interactive and effective for medical students.
How does Dr. Malla's research help patients with immune disorders?
His studies focus on understanding metabolic processes that affect immune function, which can lead to better treatments for patients with immune-related conditions.
What advancements has Dr. Malla made in understanding spondylodiscitis?
He developed a clinical scoring system to help differentiate between mycobacterial and bacterial causes of spinal infections, aiding faster treatment decisions.

Publications in plain English

A physics informed neural network architecture for moving boundary problems in science and engineering.

2026

Neural networks : the official journal of the International Neural Network Society

Malla S, Oelz D, Roy S

Plain English
This study focuses on a new approach to solving problems where boundaries are constantly changing, which is important in fields like engineering and science. Researchers developed a specialized system using Physics-Informed Neural Networks, which successfully tracks these moving boundaries and related variables more easily than traditional methods. Their new architecture shows promise in tackling complex scenarios, offering a more efficient way to understand and predict how these changing boundaries affect systems. Who this helps: This benefits scientists and engineers working on problems with moving boundaries in their research and applications.

PubMed

An evaluation of the returns to biotech canola considering health, production and environmental externalities.

2026

GM crops & food

Malla S, Brewin DG

Plain English
This study looked at how biotech canola (a type of genetically modified canola) affects health care costs, greenhouse gas emissions, and overall economic benefits in Canada. It found that the health care savings and reduced carbon emissions linked to using and producing canola oil could add over 20% to the financial gains from advancements in biotech canola. This is important because it highlights the broader benefits of investing in agricultural research and making informed agriculture policies. Who this helps: This helps patients, farmers, and policymakers.

PubMed

ZIP8 loss impairs macrophage-mediated phagolysosomal removal of bacteria and is overcome by butyrate supplementation.

2026

Communications biology

Smith DR, Haq S, Niu M, Malla S, Saha R +5 more

Plain English
This research studied how a loss of a protein called ZIP8 affects immune cells, specifically macrophages, in their ability to fight off pneumonia-causing bacteria. In mice lacking ZIP8, researchers found that these immune cells did not function properly and allowed more bacteria to survive, leading to worse health outcomes. However, when the mice received a supplement called phenylbutyrate, their immune cells improved, and they were better able to clear the bacteria from their lungs. Who this helps: This helps patients at risk of pneumonia and healthcare providers seeking better treatments.

PubMed

A Closed Computational-Experimental Loop Identifies Metabolic Collapse at the Root of Macrophage Dysfunction due to Zinc Dyshomeostasis.

2026

bioRxiv : the preprint server for biology

Malla S, Smith DR, Peer AM, Samuelson DR, Knoell DL +1 more

Plain English
This study looked at how a specific protein called ZIP8 affects immune cells called macrophages when zinc levels are not balanced. Researchers found that macrophages without ZIP8 had problems with energy use and struggled to fight infections, especially noted in tests with mice; these dysfunctional cells had decreased energy activity and poor infection control. The study highlights that restoring certain metabolites could improve immune function and suggests that zinc balance is crucial for a healthy immune response. Who this helps: This helps patients with zinc deficiency and conditions affecting immune function.

PubMed

Multi-omics integration in genome-scale metabolic models: a review of constraint-based approaches.

2026

Molecular omics

Shahreen N, Osinuga A, Malla S, Razmpour T, Tabibian M +1 more

Plain English
This paper reviews how scientists improve complex models that describe how cells use nutrients and energy, known as genome-scale metabolic models (GEMs). The researchers discuss various approaches to combine different types of biological data to make these models more accurate and practical, highlighting the importance of strict guidelines for reliable results. This work is crucial as it helps create better models that can assist in improving treatments in medicine, advancing biotechnology, and supporting sustainable agricultural practices. Who this helps: This benefits researchers, doctors, and industries involving biotech and agriculture.

PubMed

Pathway thermodynamic analysis postulates change in glutamate metabolism as a key factor in modulating immune responses.

2026

Immunometabolism (Cobham, Surrey)

Malla S, Saha R

Plain English
This study looked at how temperature changes, like those that occur during a fever, affect the way our bodies process substances, particularly focusing on glutamate metabolism and its role in immune responses. Researchers found that increasing temperatures can change the efficiency of various metabolic reactions, highlighting the importance of certain compounds like fructose-1,6-bisphosphate and glucose-6-phosphate in how our immune system works. This matters because understanding these metabolic changes could lead to better treatments for immune-related issues. Who this helps: This research helps doctors and scientists working on improving immune health and treatment options for patients with immune disorders.

PubMed

Neurological Infections in HIV: A Case-Based Review for Clinicians.

2026

Le infezioni in medicina

Gupta N, Bhat B, Adhikari SD, Singh S, Malla S +4 more

Plain English
This study looks at how advanced HIV can lead to serious brain infections and other neurological problems, focusing on eight specific cases. It found that conditions like cryptococcal meningitis and toxoplasmosis are common and can be effectively diagnosed and managed even in places with limited medical resources. Understanding these issues and how to treat them is crucial because they significantly impact the health of people living with advanced HIV. Who this helps: This benefits healthcare providers and patients with advanced HIV, especially in low-resource settings.

PubMed

Ana-Art Rangoli as an Active Learning Strategy in Undergraduate Anatomy Education: An Innovative Educational Approach.

2026

Cureus

Bokan RR, Sharma B, Malhotra R, Choudhary R, Vatsa M +2 more

Plain English
This study looked at a new way to teach anatomy to first-year medical students by having them create colorful rangoli designs that represent different anatomical topics. The students worked in groups to make their designs and successfully demonstrated accurate anatomical knowledge and teamwork during the activity. Overall, this method kept students engaged and helped them better understand complex anatomy concepts. Who this helps: This helps medical students by making anatomy learning more interactive and effective.

PubMed

Identification of race 2 anthracnose resistance Quantitative Trait Loci using biparental and association panel of diverse watermelon germplasm accessions.

2026

TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik

Bhatta BP, Kaur L, Correa E, Bhattarai G, Patel T +4 more

Plain English
Plant geneticists identified the chromosomal regions that give certain watermelon varieties resistance to race 2 anthracnose, a destructive fungal disease. Using both family-based and population-wide genetic mapping, they pinpointed three resistance loci on chromosomes 3, 6, and 8 near genes encoding immune receptor-like proteins. These markers can now be used in breeding programs to develop disease-resistant watermelon varieties.

PubMed

Tunnel sign in patients with melioidosis: a case series from South India.

2025

Transactions of the Royal Society of Tropical Medicine and Hygiene

Gupta N, Malla S, Kumar TP, Singh S, Varma M +1 more

Plain English
This study examined the use of a specific MRI finding called the tunnel sign to help diagnose neuromelioidosis, a serious condition caused by the bacteria that lead to melioidosis. Out of 177 melioidosis patients, 21 had signs of possible brain involvement, but only 7 were confirmed to have neuromelioidosis. Of the 6 patients with neuromelioidosis who had MRI scans, 4 showed the tunnel sign, indicating it may be a helpful tool for doctors in making an early diagnosis. Who this helps: This benefits doctors and health care providers treating patients with melioidosis.

PubMed

Abscesses due to Melioidosis: A case-based review.

2025

Current research in microbial sciences

Gupta N, Malla S, Boodman C, Kumar TP, Varma M +1 more

Plain English
This research looked at melioidosis, a serious infection that can cause abscesses, in nine patients with different types of abscesses, including in the lungs and liver. The study found that patients with melioidosis often have other health issues, like diabetes, which can make the infection worse. Understanding how melioidosis leads to abscesses is important because it helps doctors treat affected patients more effectively. Who this helps: This helps doctors and healthcare providers in treating patients with melioidosis.

PubMed

Plasmids encode and can mobilize onion pathogenicity in Pantoea agglomerans.

2025

The ISME journal

Shin GY, Asselin JA, Smith A, Aegerter B, Coutinho T +19 more

Plain English
This study focused on understanding why some strains of the bacteria Pantoea agglomerans can cause rot in onions while others cannot. Researchers analyzed over 300 samples and found that the harmful strains belong to a specific group that has a particular genetic feature linked to their ability to cause disease. They discovered that these harmful bacteria can share this ability through plasmids, small DNA circles, which can turn non-harmful strains into pathogens, showing that managing these plasmids is important for controlling onion diseases. Who this helps: This research benefits farmers and agricultural specialists working to prevent onion diseases.

PubMed

Bleeding pseudoaneurysms in postoperative upper gastrointestinal surgery patients: a single -center experience.

2025

Journal of surgical case reports

Sah R, Rawal SB, Malla S, Rayamajhi J, Bhat PS

Plain English
This study looked at six patients who developed dangerous bleeding caused by pseudoaneurysms after upper gastrointestinal surgery. Out of these patients, four experienced significant bleeding, and two had complications from leaks at the surgical site. All patients received treatment through a specific procedure called angioembolization, but three needed additional treatments due to recurring bleeding, highlighting the need for quick detection and management to improve survival chances, as one patient did not survive the complications. Who this helps: This research helps surgeons and doctors treating patients after upper GI surgery.

PubMed

A left paraduodenal hernia causing bowel obstruction: a case report.

2025

Journal of surgical case reports

Sah R, Rawal SB, Malla S, Rayamajhi J, Bhat PS

Plain English
This study focuses on a rare type of hernia called a left paraduodenal hernia, which caused a bowel blockage in a 59-year-old man. Imaging techniques showed that the man's small intestine was bunched up in the upper left side of his abdomen, and surgery confirmed the diagnosis. Quick identification and surgical treatment are essential to avoid serious health issues and improve recovery, as these hernias can lead to complications if not treated promptly. Who this helps: This helps patients suffering from bowel obstructions caused by internal hernias.

PubMed

Endocytic highways: Navigating macropinocytosis and other endocytic routes for precision drug delivery.

2025

International journal of pharmaceutics

Neupane R, Malla S, Karthikeyan C, Asbhy CR, Boddu SHS +2 more

Plain English
This research paper studies how different ways cells take in drugs can affect the delivery of treatments inside cells, focusing on a method called macropinocytosis, which allows cells to absorb large amounts of material. The authors found that while small drugs can easily pass through cell membranes, larger drugs and complex systems, like nanoparticles, rely on endocytosis to enter cells more effectively. Understanding these pathways can help improve the design of drug treatments, making them more effective at reaching their targets inside the cell. Who this helps: This benefits patients needing advanced therapies, including those with cancer or genetic disorders.

PubMed

Simulation of a Free Boundary Cell Migration Model through Physics Informed Neural Networks.

2025

Journal of the mechanical behavior of biomedical materials

Malla S, Oelz D, Roy S

Plain English
This study focused on how cells move, using a new computer model to better understand the forces at play during this process. The researchers created a sophisticated simulation that captures key interactions inside the cell and how they affect movement. Their model showed results that matched real-life experiments and existing data, demonstrating its effectiveness in studying cell behavior without needing extra data for training. Who this helps: This benefits researchers studying cell behavior and could lead to advancements in cancer treatment and regenerative medicine.

PubMed

Primary surgery of subcondylar mandibular fracture using patient-specific implant. Comment by Amnuay Kleebayoon & Viroj Wiwanitkit: author's reply.

2025

Oral and maxillofacial surgery

Saloniemi M, Malla S, Valtteri L, Johanna S

PubMed

High-resolution multi-modal imaging of sub-cellular structures with low numerical aperture objective.

2025

JPhys photonics

Khoubafarin S, Nath P, Malla S, Desai D, Gorgas WD +2 more

Plain English
This study looked at how to improve the clarity of images of tiny structures inside cells, specifically breast cancer cells, using a simpler type of microscope. By using a special setup with a low-cost lens and a microlens to capture more detailed images, researchers achieved a resolution better than 400 nanometers. This is important because it makes high-quality imaging more accessible and affordable, especially in places that don't have expensive lab equipment. Who this helps: Patients and doctors in low-resource settings.

PubMed

Salvage laser lithotripsy for hepatolithiasis in complex biliary anatomy: a case report.

2025

Annals of medicine and surgery (2012)

Acharya S, Laudari U, Bhat PS, Rayamajhi J, Malla S +1 more

Plain English
This study looked at a case of a 59-year-old woman who had gallstones in her bile ducts after multiple surgeries for other complications. Traditional treatment methods didn’t work for her, but using laser lithotripsy successfully broke up the stones, allowing for their removal and avoiding more invasive procedures. This is important because it shows that laser treatment can be an effective option for patients with complicated bile duct issues when other treatments fail. Who this helps: This benefits patients with complicated biliary conditions, especially those who have had previous surgeries.

PubMed

Immunometabolism at the Crossroads of Infection: Mechanistic and Systems-Level Perspectives from Host and Pathogen.

2025

ArXiv

Malla S, Shahreen N, Saha R

Plain English
This paper studies how the body's metabolism affects immune cell functions during infections. It found that metabolic processes, like how cells use sugar and oxygen for energy, play a crucial role in how immune cells respond to threats like bacteria and viruses. Understanding these metabolic pathways can lead to new treatments that boost immune responses and help clear infections more effectively. Who this helps: This benefits patients with infections and doctors seeking better treatments.

PubMed

Cell-specific RNA isoform remodeling in the aging mouse brain.

2025

bioRxiv : the preprint server for biology

Rehman A, Duffy M, Gresova K, Belair C, Yang N +8 more

Plain English
This study looked at how the RNA in different brain cells of aging mice changes over time. Researchers found that as mice age, there are specific changes in RNA processing that affect how genes are expressed, particularly in immune cells where signs of aging were significantly higher. These findings are important because they help us understand how aging can affect brain function and could lead to new ways to identify age-related conditions. Who this helps: This benefits researchers studying aging, as well as doctors looking to better understand age-related diseases.

PubMed

Mitochondria as Regulators of Nonapoptotic Cell Death in Cancer.

2025

MedComm

Malla S, Neupane R, Sood S, Hussein N, Abou-Dahech M +4 more

Plain English
This study looks at how mitochondria, the energy-producing parts of cells, play a role in nonapoptotic cell death (NACD), which is a way cells can die that doesn't involve the usual process of programmed cell death. Researchers found that various forms of NACD, such as ferroptosis and pyroptosis, are influenced by mitochondrial functions like energy production and the release of certain substances. Understanding these mechanisms is essential because they could lead to new treatments for cancer cells that resist traditional therapies. Who this helps: This helps cancer patients, particularly those whose tumors do not respond to standard treatments.

PubMed

Oral Administration of GnRH and Domperidone via Gel Feed and Their Effect on Reproductive Performance of(Bengal Danio), an Ornamental Fish.

2025

Gels (Basel, Switzerland)

Deb S, Biswas P, Singh SK, Waikhom G, Debbarma R +10 more

Plain English
This study looked at how adding hormones, GnRH and domperidone, to the diet of Bengal Danio fish affects their ability to reproduce over a 40-day period. The best results were found when fish received the highest doses of these hormones, showing increased reproductive development and an average of 1,300 eggs laid. However, the control group without hormones had higher fertilization and hatching rates, indicating that while hormones can boost egg production, they don't always lead to successful reproduction. Who this helps: This research benefits fish breeders and aquarists looking to improve the breeding success of ornamental fish.

PubMed

Anticancer Activity of Secondary Metabolites Extracted from Endophytic Fungus in Pongamia pinnata Barks.

2025

Asian Pacific journal of cancer prevention : APJCP

Mahmood BS, Faisal AJ, Thanoon AH, Saeed BA, Sulaiman GM +1 more

Plain English
This study looked at natural compounds from a specific fungus called Trichoderma, which were extracted from the bark of the Pongamia pinnata tree, to see how they could fight cancer. The researchers found that these compounds significantly decreased the survival of leukemia cells in lab tests, reducing cell viability from 94.3% to 54.35% while increasing the number of dying cells. This is important because it shows that these fungus extracts could be a new way to develop treatments for leukemia. Who this helps: Patients with leukemia.

PubMed

Validation of a clinical scoring system to differentiate mycobacterial and bacterial causes of spondylodiscitis: a retrospective cohort study from Kerala, India.

2025

Le infezioni in medicina

Niyas VKM, Ananthanarayanan R, Zunimol MP, Mohan D, Malla S +4 more

Plain English
This study examined a scoring system designed to help doctors tell the difference between mycobacterial and bacterial infections in patients with spinal infections called spondylodiscitis. Out of 151 patients, 32 had mycobacterial infections and 41 had bacterial infections, showing that both types had different characteristics, such as age and duration of symptoms. The scoring system was found to be quite accurate for identifying bacterial infections, which can help doctors make faster treatment decisions in areas where lab testing might be slow or unavailable. Who this helps: This helps doctors treat patients with spinal infections more effectively.

PubMed

Identification and Mechanistic Profiling of Indolin-2-One Derivatives That Induce ROS-Driven Intrinsic Apoptosis in Prostate and Colorectal Cancer Cells.

2025

Journal of biochemical and molecular toxicology

Neupane R, Karthikeyan C, Malla S, Khan JT, Ashby CR +7 more

Plain English
This study looked at new chemical compounds called indolin-2-ones to see how effectively they kill prostate and colon cancer cells. The researchers found that one compound, referred to as Raji 10, was particularly powerful, reducing the growth of prostate cancer cells with a concentration less than 5 micromolar, and another compound, Raji 16, was effective against colon cancer cells at about 2.93 micromolar. This is important because these compounds may offer a new way to treat these cancers by triggering the cell's natural death process, which could improve outcomes for patients. Who this helps: This helps cancer patients, particularly those with prostate and colon cancers.

PubMed

Immunometabolism at the crossroads of infection: mechanistic and systems-level perspectives from host and pathogen.

2025

Immunometabolism (Cobham, Surrey)

Malla S, Shahreen N, Saha R

Plain English
This study examines how the body's metabolism affects immune cell function during infections caused by bacteria, viruses, and fungi. It found that important metabolic processes help shape how immune cells respond to these pathogens, which can either strengthen or weaken the body's defense. Understanding these processes opens new possibilities for treatments that can boost immune responses and help the body fight infections better. Who this helps: Patients facing infections and their healthcare providers.

PubMed

Tunnel sign on magnetic resonance imaging in neuromelioidosis: A systematic literature review.

2025

New microbes and new infections

Gupta N, Singh S, Kumar TP, Malla S, Sethi A +6 more

Plain English
This research studied patients with neuromelioidosis, a serious infection that can lead to brain and nerve problems, and found that a specific clue on MRI called the "tunnel sign" can help diagnose the condition early. Out of 30 cases reviewed, many patients experienced limb weakness (89%) and complications involving cranial nerves (46%), but only a small number had positive blood or spinal fluid tests, indicating a risk of misdiagnosis. Detecting the tunnel sign can lead to quicker and better treatment, which is crucial since about 30% of these patients died from the disease. Who this helps: This helps doctors and healthcare providers in areas where neuromelioidosis is common.

PubMed

Visual Functions in Patients with Optic Neuritis Pre and Post Treatment: An Observational Study.

2025

JNMA; journal of the Nepal Medical Association

Malla S, Shrestha S

Plain English
This study looked at how steroid treatment affects vision in patients with optic neuritis, which is an inflammation of the optic nerve that can cause severe vision loss. Out of 37 eyes studied, initially, 64.86% had very poor vision, but after treatment, 56.76% showed significant improvement in their vision six weeks later. Additionally, more patients gained normal colour vision and improved contrast sensitivity over time, indicating that steroids can effectively help restore vision in these patients. Who this helps: This benefits patients with optic neuritis who are seeking to recover their vision.

PubMed

Mapping the functional impact of non-coding regulatory elements in primary T cells through single-cell CRISPR screens.

2024

Genome biology

Alda-Catalinas C, Ibarra-Soria X, Flouri C, Gordillo JE, Cousminer D +11 more

Plain English
This study focused on understanding how certain genetic regions, which don't directly code for proteins, affect the function of immune cells called T cells. The researchers used a method called CRISPR to examine around 250,000 individual T cells and identified connections between 45 regulatory regions and specific genes. They found that their approach could pinpoint both known and new gene links, which is crucial for improving drug development for immune diseases. Who this helps: This benefits researchers and doctors working on immune-related diseases and drug development.

PubMed

Reversed halo sign: Do not forget Melioidosis.

2024

Journal of travel medicine

Gupta N, Malla S, Tirlangi PK, Magazine R, Uk C +4 more

PubMed

Intraoperative electrocorticography-guided resection of the epileptogenic zone in an unusual porencephalic cyst: case report and literature review.

2024

Annals of medicine and surgery (2012)

Dahal R, Gurung P, Kayastha J, Malla S, Badinski T +2 more

Plain English
This study looked at a rare type of brain cyst in a 23-year-old woman who experienced seizures that didn't respond to medication. Researchers found that during surgery, the area causing her seizures was located two brain sections away from the cyst, which is different from what is usually seen in other cases. This matters because understanding the precise area of the brain involved in seizures can help improve the success of surgical treatment. Who this helps: This helps patients with epilepsy that does not respond to medication.

PubMed

Limited significance of bicarbonate therapy in the treatment of diabetic ketoacidosis: a rare case report in the periphery of Nepal.

2024

Annals of medicine and surgery (2012)

Shrestha P, Gautam AR, Malla S, Parajuli S, K C R

Plain English
This study looked at a case of a 21-year-old woman who was severely ill with diabetic ketoacidosis (DKA), a serious complication of diabetes, with a dangerously low blood pH of less than 6.6. The patient was treated with standard care—IV fluids, insulin, and potassium—without using bicarbonate therapy, which is usually not recommended because it doesn't improve outcomes. The findings emphasize that focusing on proper hydration and insulin is crucial for treating DKA, as bicarbonate therapy does not help. Who this helps: This information helps doctors treating patients with diabetic ketoacidosis.

PubMed

Attitude towards Spirituality and Spiritual Care among Nurses of Bharatpur Hospital.

2024

Journal of Nepal Health Research Council

Malla S, Ghimire A

Plain English
This study looked at how nurses at Bharatpur Hospital feel about spirituality and spiritual care, which are important for giving complete care to patients. Among the 208 nurses surveyed, 60% had a moderate understanding of spirituality and spiritual care, while 40% had a high understanding, and only 0.5% had a low understanding. The findings highlight the need for better training and awareness for nurses in providing spiritual care, as most have a moderate understanding of its importance. Who this helps: This benefits nurses and, ultimately, the patients they care for by improving the quality of care provided.

PubMed

Molecular profiling of frontal and occipital subcortical white matter hyperintensities in Alzheimer's disease.

2024

bioRxiv : the preprint server for biology

Malla S, Bryant AG, Jayakumar R, Woost B, Wolf N +4 more

Plain English
This study examined changes in specific parts of the brain's white matter in people with Alzheimer's disease (AD) compared to healthy aging individuals. Researchers found that in the brains of those with AD, genes linked to blood vessel function and immune responses were more active, particularly in areas with more white matter hyperintensities (WMHs). This matters because understanding these molecular changes can help us grasp how Alzheimer's affects the brain and could guide future treatments. Who this helps: This helps patients with Alzheimer's and their caregivers by providing insights that may lead to better management and care options.

PubMed

Novel Thienopyrimidine-Hydrazinyl Compounds Induce DRP1-Mediated Non-Apoptotic Cell Death in Triple-Negative Breast Cancer Cells.

2024

Cancers

Malla S, Nyinawabera A, Neupane R, Pathak R, Lee D +9 more

Plain English
This study focused on two new compounds, TPH104c and TPH104m, which were tested against triple-negative breast cancer (TNBC) cells. The researchers found that these compounds caused cancer cell death without triggering the typical process of apoptosis, being 15 to 30 times more effective in targeting TNBC cells than normal breast cells. This is important because many TNBC cells can resist standard treatments, so finding new ways to kill them could lead to better therapies. Who this helps: This research benefits patients with triple-negative breast cancer who need more effective treatment options.

PubMed

Histopathological Spectrum of Gliomas and Its Immunohistochemical Correlation in a Tertiary Care Setup.

2024

Cureus

Malla S, Bavikar R, Gore C, Chugh A, Gurwale S

Plain English
This study examined different types of brain tumors called gliomas to understand their characteristics and how certain genetic changes relate to their behavior. Researchers looked at 54 glioma samples and found that glioblastomas made up about 46% of the cases, with almost all astrocytomas showing specific genetic changes linked to worse outcomes. These findings are important because they can help doctors better classify gliomas and tailor treatment for patients. Who this helps: This helps patients diagnosed with gliomas by improving their treatment options and prognosis assessments.

PubMed

Deep learning and direct sequencing of labeled RNA captures transcriptome dynamics.

2024

NAR genomics and bioinformatics

Martinek V, Martin J, Belair C, Payea MJ, Malla S +2 more

Plain English
This study explored a new tool called RNAkinet, which uses advanced deep learning techniques to track the life cycle of different RNA molecules in cells. The researchers found that RNAkinet effectively distinguishes newly made RNA from older RNA across various cell types, allowing them to measure how long these RNA molecules last. This is important because understanding RNA dynamics can reveal how genes are regulated, helping us learn more about cellular processes. Who this helps: This helps researchers studying gene regulation and RNA metabolism.

PubMed

The scaffolding function of LSD1 controls DNA methylation in mouse ESCs.

2024

Nature communications

Malla S, Kumari K, García-Prieto CA, Caroli J, Nordin A +20 more

Plain English
This study focused on a protein called LSD1 and its role in the growth and development of mouse embryonic stem cells (ESCs). Researchers found that while LSD1 is not needed for these stem cells to maintain their stemness, it is crucial for their growth and ability to develop into other cell types; specifically, without LSD1, certain proteins important for DNA methylation are not stable, leading to less DNA methylation overall. This matters because understanding how LSD1 works could help scientists develop better strategies for manipulating stem cells for research and therapy. Who this helps: This helps researchers and doctors working with stem cells and regenerative medicine.

PubMed

Cholecystocutaneous fistula after cholecystectomy.

2024

Journal of surgical case reports

Sah R, Rawal SB, Malla S, Rayamajhi J, Bhat PS

Plain English
This study looked at cholecystocutaneous fistula, a rare condition where a connection forms between the gallbladder and the skin, usually after gallbladder surgery. The research found that a traditional open surgery to remove the fistula is highly effective, while minimally invasive surgery can also work well if done by skilled surgeons. Understanding this condition is important because it helps doctors diagnose and treat patients who may experience severe symptoms like fever and vomiting due to this rare complication. Who this helps: This information benefits patients who develop complications after gallbladder surgery.

PubMed

Senescence suppresses the integrated stress response and activates a stress-remodeled secretory phenotype.

2024

Molecular cell

Payea MJ, Dar SA, Anerillas C, Martindale JL, Belair C +10 more

Plain English
This study focused on how aging cells, known as senescent cells, respond to stress. Researchers found that these cells do not respond properly to stressors like protein damage or lack of amino acids, leading to a limited ability to activate important stress response factors. Specifically, even when under stress, they struggle to produce a protein called ATF4, which normally helps cells cope with stress, and instead increase inflammatory signals that could contribute to age-related diseases. Who this helps: This helps patients dealing with age-related conditions and their doctors by providing insights into cellular processes that affect health as we age.

PubMed

Cooperative role of LSD1 and CHD7 in regulating differentiation of mouse embryonic stem cells.

2024

Scientific reports

Malla S, Martinez-Gamero C, Kumari K, Achour C, Mermelekas G +5 more

Plain English
This study explored how two proteins, LSD1 and CHD7, work together to control the differentiation of mouse embryonic stem cells. Researchers found that when both proteins were removed, the stem cells couldn’t grow or differentiate properly. Specifically, double knockout cells faced similar growth issues as those missing only LSD1, which indicates that both proteins play a crucial role in guiding the cells to develop correctly. Who this helps: This research benefits scientists studying stem cell development and potential therapies for developmental disorders.

PubMed

Antifungal activity of zinc oxide nanoparticles (ZnO NPs) onphytopathogen isolated from tomato plant in Nepal.

2024

Heliyon

Subba B, Rai GB, Bhandary R, Parajuli P, Thapa N +4 more

Plain English
This study looked at how zinc oxide nanoparticles (ZnO NPs) can stop a harmful fungus that affects tomato plants in Nepal. It found that when these nanoparticles were used at concentrations between 750 and 1200 parts per million, they reduced fungus growth by 77.6% to 85.1% over a week. This is important because it shows that ZnO NPs could be a new, environmentally friendly way to protect crops from fungal diseases. Who this helps: This helps farmers and agricultural producers working to protect their crops.

PubMed

Dissecting metabolic landscape of alveolar macrophage.

2024

Scientific reports

Malla S, Sajeevan KA, Acharya B, Chowdhury R, Saha R

Plain English
This study looked at how certain immune cells in the lungs, called alveolar macrophages, change their metabolism when responding to different signals, specifically during two active states known as M1 and M2. The researchers found that specific metabolic pathways and reactions are key in switching between these states, with potential targets identified for new treatments. Understanding this process is important because it could lead to better therapies for serious lung diseases. Who this helps: Patients with respiratory disorders.

PubMed

Full-length direct RNA sequencing uncovers stress granule-dependent RNA decay upon cellular stress.

2024

eLife

Dar SA, Malla S, Martinek V, Payea MJ, Lee CT +5 more

Plain English
This research studied how cells respond to stress by examining changes in RNA, which carries genetic information. The scientists found that when cells experience stress, a significant amount of RNA starts to decay, specifically at the beginning of the RNA molecule, which is linked to the processes of translation and ribosome activity. They discovered that this decay relies on a specific protein called XRN1 and is connected to the formation of stress granules, which are cellular structures that help manage stress responses. Who this helps: This helps researchers and doctors understand how cells manage stress at a molecular level, potentially leading to better treatments for stress-related diseases.

PubMed

Pathway Thermodynamic Analysis Postulates Change in Glutamate Metabolism as a Key Factor in Modulating Immune Responses.

2024

bioRxiv : the preprint server for biology

Malla S, Saha R

Plain English
This research studied how changes in body temperature during fever affect metabolism and immune responses. The scientists found that specific metabolic intermediates, particularly those involved with glutamate, play a crucial role in regulating these processes; for instance, they noted significant shifts in energy levels (Gibbs free energy) at different temperatures. Understanding these changes is important because it could help develop treatments that reduce the harmful effects of fever while keeping its positive impacts on fighting infections. Who this helps: This benefits patients experiencing fever and their doctors.

PubMed

Factors Affecting Growth and Survival ofin Onion Extracts and Onion Bulbs.

2024

Foods (Basel, Switzerland)

Kiplagat E, Ramezani M, Malla S, Cisneros-Zevallos L, Joshi V +1 more

Plain English
This study looked at how different onion extracts and bulbs grow and survive when exposed to various light colors and tested against a harmful bacteria called Newport. The researchers found that blue light had the strongest effect, reducing bacteria growth on the outer layers of red and white onions, while the bacteria thrived inside the bulbs. This matters because it shows that using specific light during onion curing can help improve food safety by controlling harmful bacteria levels. Who this helps: This helps farmers and food producers improve the safety of onion products.

PubMed

Molecular profiling of frontal and occipital subcortical white matter hyperintensities in Alzheimer's disease.

2024

Frontiers in neurology

Malla S, Bryant AG, Jayakumar R, Woost B, Wolf N +4 more

Plain English
This study looked at specific brain changes called white matter hyperintensities (WMHs) in people with Alzheimer's disease (AD), comparing them to healthy older adults. Researchers found increased activity of certain genes in the affected areas of the brain that relate to blood vessel function and immune responses. Specifically, people with more WMHs showed higher levels of genes tied to immune activity, highlighting how these changes may play a role in the cognitive decline seen in Alzheimer's. Who this helps: This research helps doctors and scientists better understand how Alzheimer's disease damages the brain, which can lead to better treatments for patients.

PubMed

Deep learning and direct sequencing of labeled RNA captures transcriptome dynamics.

2023

bioRxiv : the preprint server for biology

Martinek V, Martin J, Belair C, Payea MJ, Malla S +2 more

Plain English
This study looked at how RNA is produced and decayed in cells, which is important for understanding how genes work in healthy and diseased states. Researchers developed a new method called RNAkinet that uses a special labeling technique and advanced machine learning to analyze RNA more accurately. They found that this method reliably measures RNA activity and connects it to factors that affect RNA stability, across different types of cells and organisms. Who this helps: This benefits researchers studying gene regulation and could improve our understanding of diseases at the molecular level.

PubMed

Intra-abdominal omental mass as a desmoplastic round cell tumor: A rare case report.

2023

Clinical case reports

Bohara S, Jha P, Bhat PS, Malla S, Karki S +3 more

Plain English
This study looked at a rare type of cancer called a desmoplastic round cell tumor, which can occur as a mass in the abdomen. Researchers reported on a young adult patient who had this tumor and successfully underwent surgery to remove it, with no signs of the cancer coming back after six months. Recognizing this tumor early can lead to better treatment outcomes and improved survival chances for patients. Who this helps: This helps patients diagnosed with rare abdominal tumors.

PubMed

Frequent Co-Authors

Rajib Saha Nitin Gupta Amit K Tiwari Cedric Belair Manolis Maragkakis Muralidhar Varma Tirlangi Praveen Kumar Chiranjay Mukhopadhyay Rabin Neupane R Jayachandra Babu

Physician data sourced from the NPPES NPI Registry . Publication data from PubMed . Plain-English summaries generated by AI. Not medical advice.