Autar K Mattoo

Transplant Institute, NYU Langone Health, New York, NY, USA.

50 publications 2019 – 2026 ORCID

What does Autar K Mattoo research?

Autar K Mattoo studies the field of organ transplantation, especially the use of genetically modified pig organs to replace failing human organs. He investigates how the immune system responds to these transplants and works on finding ways to prolong the survival of these pig organs in humans. This includes understanding various conditions that arise after transplantation, such as rejection and infections, and testing new treatments that may improve the success of transplants. Mattoo is also involved in ensuring that individuals receiving organ transplants experience a better quality of life during their recovery.

Key findings

  • In a study of kidney transplantation from pig to human, researchers noted a significant immune response with rejection occurring around day 33, despite the use of standard anti-rejection drugs.
  • A pilot study on hepatitis C positive kidney transplants found that a 14-day treatment with glecaprevir/pibrentasvir led to a 100% sustained virus-free response among 20 recipients after one year.
  • In a retrospective examination of emergency department diagnoses, only 82% of initial diagnoses aligned with final hospital diagnoses, with discrepancies affecting treatment in 8% of misdiagnosed cases.

Frequently asked questions

Does Dr. Mattoo study organ transplantation?
Yes, Dr. Mattoo focuses on organ transplantation, particularly using genetically modified pig organs in humans.
What are some of the treatments Dr. Mattoo has researched?
He has researched immunosuppressive therapies to prevent organ rejection, including standard drugs and new prophylactic treatments for hepatitis C transmission in kidney transplants.
Is Dr. Mattoo's work relevant for patients on dialysis?
Yes, his research into pig kidney transplants offers potential hope for patients needing a kidney replacement, particularly those who may not have suitable human donors available.
What did Dr. Mattoo find about immune responses in xenotransplantation?
He discovered specific immune responses, such as T cell accumulation leading to rejection of pig organs, indicating how to better monitor and potentially manage these responses.
How does Dr. Mattoo's research benefit future transplant candidates?
His work helps to develop better decision-support tools and educational resources for future transplant candidates, aiming to improve their experiences and outcomes.

Publications in plain English

Beyond theory and into practice: A qualitative study of the experiences of xenotransplant recipients.

2026

American journal of transplantation : official journal of the American Society of Transplantation and the American Society of Transplant Surgeons

Levan ML, Ahuja HK, Reed RD, Locke J, Sidoti CN +16 more

Plain English
Interviews with the first three living recipients of pig kidney transplants revealed that all three experienced a renewed sense of hope compared to their lives on dialysis. Recipients emphasized that trust and clear communication with their medical teams were essential, and they felt psychologically prepared for the possibility that the transplant might fail. These insights can guide the development of decision-support tools and educational materials for future xenotransplant candidates.

PubMed

Physiology and immunology of a pig-to-human decedent kidney xenotransplant.

2026

Nature

Montgomery RA, Stern JM, Fathi F, Suek N, Kim JI +48 more

Plain English
A gene-edited pig kidney was transplanted into a brain-dead human and kept functioning for a planned 61-day study using only standard approved anti-rejection drugs. The kidney maintained stable electrolyte balance and eliminated the need for dialysis, but antibody-mediated rejection emerged on day 33 and was reversed with plasma exchange and complement inhibition. The study shows a minimally modified pig kidney can sustain human-equivalent kidney function and identifies pre-existing immune cells reactive to pig tissue as a key obstacle to long-term success.

PubMed

Multi-omics analysis of a pig-to-human decedent kidney xenotransplant.

2026

Nature

Schmauch E, Piening BD, Dowdell AK, Mohebnasab M, Williams SH +68 more

Plain English
Researchers studied how the human immune system reacts to a pig kidney transplant in a brain-dead human. They found that specific immune cells in the blood increased significantly, leading to rejection of the kidney by day 33 after the transplant. This research is important because it helps identify ways to improve the success of pig organ transplants in humans, potentially addressing the shortage of available human organs for transplantation.

PubMed

Publisher Correction: Physiology and immunology of a pig-to-human decedent kidney xenotransplant.

2026

Nature

Montgomery RA, Stern JM, Fathi F, Suek N, Kim JI +48 more

PubMed

Tacrolimus in Solid Organ Transplantation: Historical Impact, Current Use, and Future Directions in Immunosuppression.

2026

Journal of pharmacy practice

Dieter R, Jaffe IS, Mattoo A

Plain English
Tacrolimus has been the backbone drug for preventing organ rejection after transplantation for over 40 years, but its narrow safe dosing range requires constant monitoring. Extended-release formulations have reduced side effects like kidney damage and improved how consistently patients take their medication. The review examines the next wave of very-extended release versions that could further smooth out drug level swings and reduce the number of pills patients need daily.

PubMed

Outcomes with distal transradial access in patients with advanced chronic kidney disease.

2025

The Journal of invasive cardiology

Mosarla RC, Ahmed H, Rao SD, Kadosh BS, Cruz JA +6 more

PubMed

Physiological traits and population dynamics of Schizothorax niger (Heckel, 1838): Insights from Dal Lake and the Jhelum River, Kashmir, Himalayan region.

2025

Journal of fish biology

Karthik N, Bhat FA, Qayoom I, Jayakumar N, Sudhan C +4 more

Plain English
Researchers compared the physiology and population biology of the Himalayan snow trout Schizothorax niger living in Dal Lake versus the Jhelum River in Kashmir, finding that fish in the river were larger and had different blood chemistry than those in the lake. Water conditions differed between sites, with the river having higher dissolved oxygen and lower temperature, which correlated with the observed differences in fish size and metabolism. The data provide a baseline for conservation planning specific to each habitat.

PubMed

Trials and Tribulations: Responses of ChatGPT to Patient Questions About Kidney Transplantation.

2025

Transplantation

Xu J, Mankowski M, Vanterpool KB, Strauss AT, Lonze BE +17 more

PubMed

Prophylactic 2-week glecaprevir/pibrentasvir in hepatitis C positive-to-negative kidney transplantation.

2025

Nephrology, dialysis, transplantation : official publication of the European Dialysis and Transplant Association - European Renal Association

Dieter RA, Mattoo A, Hotchkis P, Jaffe IS, Weldon EP +4 more

Plain English
This pilot study tested whether a 14-day course of the hepatitis C drug combination glecaprevir/pibrentasvir, started just before transplant, could safely prevent or clear hepatitis C transmitted from infected donor kidneys. All 20 recipients achieved a sustained virus-free response with no relapses at one year, and 35% never developed detectable virus at all. The results support using a two-week prophylactic course as a safe and effective strategy that expands the pool of usable donor kidneys.

PubMed

Xenotransplantation: Current Understanding of the Mechanism of Immune-Mediated Injury.

2025

Journal of the American Society of Nephrology : JASN

Tatapudi VS, Mattoo A, Schiff T, Mehta SA, Skolnik EY +1 more

Plain English
Transplanting pig organs into humans offers a potential solution to the global shortage of donor organs, but immune rejection remains the central barrier. Advances in gene editing have extended pig organ survival in preclinical primate studies, and recent attempts in human decedents and living patients have revealed both antibody-driven and cell-driven rejection as key challenges. This review synthesizes what is known about the immune mechanisms involved and highlights the genetic and therapeutic strategies being developed to overcome them.

PubMed

Agreement Between Emergency Department Admission and Hospital Discharge Diagnoses; A Retrospective Observational Study.

2025

Archives of academic emergency medicine

Mattoo AI, Al-Shahrani S, Mattoo FA, Al-Asiri S, Obeid A +3 more

Plain English
This study compared the diagnosis given when a patient arrived at an emergency department against the final diagnosis at hospital discharge across nearly 7,000 cases. Diagnoses matched in about 82% of cases, with the most common reason for discrepancy being that doctors relabeled chronic diseases as the discharge diagnosis rather than the acute problem. Mismatches were most common in children under 15 and led to changes in treatment, hospital length of stay, or mortality in about 8% of the mismatched cases.

PubMed

Coordinated circulating and tissue-based T cell responses precede xenograft rejection.

2025

bioRxiv : the preprint server for biology

Novikova E, Severa E, Chen H, Doepke E, Chacon F +24 more

Plain English
Researchers transplanted a pig kidney-thymus combination into a deceased human and tracked the immune response over 61 days. T cells from the recipient infiltrated the organ and specific clones expanded in blood, tissue, and lymph nodes around rejection events. This reveals that T cell-driven rejection of pig organs in humans closely mirrors what happens with human-to-human transplants, informing how future immunosuppression strategies must be designed.

PubMed

Perspective of ethylene biology for abiotic stress acclimation in plants.

2024

Plant physiology and biochemistry : PPB

Khan MIR, Mattoo AK, Khan N, Ferrante A, Müller ML

PubMed

Unlocking allelic variation in circadian clock genes to develop environmentally robust and productive crops.

2024

Planta

Dwivedi SL, Quiroz LF, Spillane C, Wu R, Mattoo AK +1 more

Plain English
Plants have an internal 24-hour clock that coordinates growth, flowering, and stress responses with day-night cycles, and natural variation in clock genes helps different crop varieties adapt to different environments. This review examines how the molecular components of the plant circadian clock interact with hormones and growth traits, and how this knowledge could be used to breed crops that perform reliably across a wider range of climates. Gene editing of clock components is highlighted as a promising avenue for developing all-season, stress-resilient crops.

PubMed

Left ventricular diastolic function and cardiotoxic chemotherapy.

2024

The Egyptian heart journal : (EHJ) : official bulletin of the Egyptian Society of Cardiology

Rashid H, Rashid A, Mattoo A, Guru FR, Mehvish S +5 more

Plain English
This prospective study followed 80 cancer patients receiving heart-toxic chemotherapy and measured both the pumping function and filling function of the heart at baseline, three months, and six months. Diastolic (filling) dysfunction appeared earlier and in more patients than systolic (pumping) dysfunction, and the degree of diastolic dysfunction at three months predicted which patients would develop reduced pumping function by six months. Early monitoring of diastolic function could identify patients at risk before more serious heart damage occurs.

PubMed

Polysomnography parameters in a large cohort of people with multiple sclerosis.

2024

Sleep medicine

Queisi M, Cipriani V, Golan D, El Ghorayeb C, Zarif M +6 more

Plain English
Sleep is severely disrupted in people with multiple sclerosis, and this study used overnight sleep lab recordings from 299 patients to quantify just how different their sleep is from healthy norms. On average, patients slept 86 minutes less per night, took 27 minutes longer to fall asleep, had 10% lower sleep efficiency, and 61% had obstructive sleep apnea. The findings establish a concrete baseline that underscores the need to routinely screen and treat sleep disorders in MS patients.

PubMed

Maize Grain Metabolite Profiling by NMR: Effects of Growing Year, Variety, and Cropping System.

2024

Molecules (Basel, Switzerland)

Sobolev AP, Acciaro E, Milutinović M, Božunović J, Aničić N +2 more

Plain English
This study used nuclear magnetic resonance metabolomics to profile the sugars, amino acids, fatty acids, and other small molecules in maize grain grown under organic versus conventional farming systems and across multiple years and varieties. Crop variety and growing year had the largest influence on grain composition, while the farming system had a smaller effect. Organic varieties had more citric acid and doubly unsaturated fats but less of the amino acid tyrosine compared to conventional varieties.

PubMed

Improving long-term kidney allograft survival by rethinking HLA compatibility: from molecular matching to non-HLA genes.

2024

Frontiers in genetics

Mattoo A, Jaffe IS, Keating B, Montgomery RA, Mangiola M

Plain English
Standard organ matching based on a small set of immune markers misses much of the biological complexity that drives long-term transplant failure. Higher-resolution molecular matching tools that account for specific protein shapes recognized by the immune system predict rejection more accurately than traditional methods. The review outlines where molecular matching is already ready to use in practice — such as for living donors and kidney exchange programs — and what barriers remain for applying it to deceased donor allocation.

PubMed

Increasing nitrogen use efficiency in agronomically important plants: An insight into gene characteristics on a genome-wide scale in barley.

2024

Computers in biology and medicine

Paluch-Lubawa E, Tanwar UK, Stolarska E, Arasimowicz-Jelonek M, Mattoo AK +1 more

Plain English
This study identified and characterized 16 gene families involved in nitrogen metabolism across the barley genome, finding they are highly conserved across grasses but show distinct activity levels in different tissues and stress conditions. Genes for nitrate reduction were most active in leaves, while others were highest in developing grain, pointing to tissue-specific roles. The dataset provides a foundation for breeding barley varieties that use nitrogen fertilizer more efficiently.

PubMed

Unlocking the role of novel primary/di-amine oxidases in crop improvement: Tissue specificity leads to specific roles connected to abiotic stress, hormone responses and sensing nitrogen.

2024

Journal of plant physiology

Upadhyay RK, Shao J, Maul JE, Schomberg H, Handa AK +2 more

Plain English
This study identified and characterized eight genes encoding copper amine oxidase enzymes in the tomato genome, which help manage nitrogen balance inside the plant. Most of these genes are active primarily in roots, one specifically in fruit, and one in flowers, with the majority suppressed by the stress hormone methyl jasmonate. The gene CuAO5 stands out as a target for crop improvement because it is induced by heat, drought, and low nitrogen simultaneously.

PubMed

Post-COVID-19 non-traumatic iliopsoas hematoma: A case report.

2023

Journal of Taibah University Medical Sciences

Al Jumaan MA, Alahmari N, Elnour A, Alshahrani S, Mattoo A +1 more

Plain English
A 59-year-old man developed a large blood clot in his hip muscle three weeks after recovering from COVID-19, without having taken any blood thinners — only low-dose aspirin. The case highlights that even aspirin alone may contribute to unusual bleeding events in post-COVID patients and that iliopsoas hematoma, though rare, should be considered in patients presenting with unexplained leg weakness after COVID-19 infection. More research is needed to understand how COVID-19 and antiplatelet drugs interact to affect bleeding risk.

PubMed

Comprehensive profiling of endogenous phytohormones and expression analysis of 1-aminocyclopropane-1-carboxylic acid synthase gene family during fruit development and ripening in octoploid strawberry (Fragaria× ananassa).

2023

Plant physiology and biochemistry : PPB

Upadhyay RK, Motyka V, Pokorna E, Dobrev PI, Lacek J +3 more

Plain English
This study tracked 28 plant hormones across the ripening stages of strawberry fruit and found that three — abscisic acid, the ethylene precursor ACC, and the cytokinin iP — increase as the fruit ripens, while most others decline. A previously unknown family of 17 ACC synthase genes was discovered in the octoploid strawberry genome, six of which are specifically turned on during ripening. The results add new detail to how multiple hormones interact to coordinate the ripening of a non-climacteric fruit.

PubMed

Astragalicola ephedrae sp. nov., isolated from the stem of Ephedra gerardiana in Ladakh, India.

2023

Folia microbiologica

Mattoo AJ, Nonzom S

Plain English
A new species of fungus was discovered living asymptomatically inside the stems of Ephedra gerardiana plants collected from the Ladakh region of India. DNA sequence analysis and physical characteristics showed it was distinct enough from all known species in its genus Astragalicola to be named a new species, Astragalicola ephedrae. The discovery adds to knowledge of the largely unexplored diversity of plant-associated fungi from high-altitude Himalayan ecosystems.

PubMed

Correction to: Astragalicola ephedrae sp. nov., isolated from the stem of Ephedra gerardiana in Ladakh, India.

2023

Folia microbiologica

Mattoo AJ, Nonzom S

PubMed

Diverticulosis and Diverticulitis: Epidemiology, Pathophysiology, and Current Treatment Trends.

2023

Cureus

Bhatia M, Mattoo A

Plain English
Diverticular disease — the development of small pouches in the colon wall — is common in Western countries and increasingly recognized in Asia, where its clinical impact differs. The condition most often presents with abdominal pain or changed bowel habits and is detected more frequently now due to wider use of colonoscopy. Most cases are managed with medication, but severe complications or advanced disease require surgery.

PubMed

Pandemic trade: COVID-19, remote work and global value chains.

2022

The World economy

Espitia A, Mattoo A, Rocha N, Ruta M, Winkler D

Plain English
This study analyzed how COVID-19 affected international trade using monthly data from 28 countries during the first half of 2020, finding that the impact varied widely by industry sector. Sectors where workers could do their jobs remotely contracted less than those requiring physical presence. Participation in global supply chains amplified the damage from shocks hitting trading partners but provided some protection against purely domestic shocks.

PubMed

Anthocyanin-Rich Vegetables for Human Consumption-Focus on Potato, Sweetpotato and Tomato.

2022

International journal of molecular sciences

Mattoo AK, Dwivedi SL, Dutt S, Singh B, Garg M +1 more

Plain English
Anthocyanins — the purple and red pigments in fruits and vegetables — have health-protective properties, and this review examines efforts to breed or engineer food crops with higher anthocyanin content. Progress has been made in developing purple potatoes, sweet potatoes, and tomatoes using both traditional crossbreeding and genetic engineering involving specific pigment-activating genes. Anthocyanin-enriched crops offer a path toward more nutritious food, particularly in developing regions where diet-related disease is increasing.

PubMed

Fungal and oomycete pathogens and heavy metals: an inglorious couple in the environment.

2022

IMA fungus

Gajewska J, Floryszak-Wieczorek J, Sobieszczuk-Nowicka E, Mattoo A, Arasimowicz-Jelonek M

Plain English
Heavy metal pollution is a worldwide environmental problem, and while its effects on plants and animals are well studied, far less is known about how fungi and water molds (oomycetes) respond to metal contamination. This review synthesizes current evidence showing these pathogens are more metal-tolerant than bacteria, using strategies including binding metals to their cell walls and sequestering them with internal proteins. Understanding these mechanisms matters because heavy metal stress may actually increase pathogen fitness and disease risk in contaminated environments.

PubMed

Safety and efficacy of ARNI (valsartan/sacubitril) vs ACEI (enalapril) in acute heart failure - A prospective observational study.

2022

Indian heart journal

Bhat TS, Hafeez I, Tak SF, Mattoo A, Patigaroo AR +3 more

Plain English
This study compared two types of heart failure medications — the newer combination drug valsartan/sacubitril versus the older enalapril — in 200 Indian patients with acute heart failure over six months. Patients on valsartan/sacubitril had significantly fewer repeat hospitalizations and better improvement in heart pumping function, exercise capacity, and quality of life. The results support using the newer drug class earlier in the treatment of heart failure with reduced ejection fraction.

PubMed

A Randomized Double-Blinded Placebo Controlled Trial of Clazakizumab for the Treatment of COVID-19 Pneumonia With Hyperinflammation.

2022

Critical care medicine

Lonze BE, Spiegler P, Wesson RN, Alachkar N, Petkova E +18 more

Plain English
This randomized controlled trial tested whether clazakizumab, a drug that blocks the inflammatory signal interleukin-6, could help hospitalized COVID-19 patients with dangerous levels of inflammation. Patients receiving the drug had nearly four times better odds of surviving 28 days without a ventilator and were significantly less likely to need ICU admission or mechanical ventilation. Clazakizumab substantially improved survival and clinical outcomes, supporting its use for severe COVID-19 with hyperinflammation.

PubMed

MCL-1 interacts with MOF and BID to regulate H4K16 acetylation and homologous recombination repair.

2022

Cell biology international

Mattoo AR, Jessup JM

Plain English
MCL-1, a protein best known for protecting cancer cells from death, was found to also regulate DNA repair by forming a complex with two other proteins — MOF and BID — to control a chemical mark on chromosomes that enables accurate DNA repair. When MCL-1 is reduced, DNA repair is less efficient, and cells are more likely to die from replication stress; removing BID alongside MCL-1 restores repair efficiency. The study reveals an unexpected role for this anti-death protein in maintaining genome stability and links the cell death and DNA repair pathways.

PubMed

Endophytes in Lignin Valorization: A Novel Approach.

2022

Frontiers in bioengineering and biotechnology

Mattoo AJ, Nonzom S

Plain English
Lignin, the tough structural polymer in plant cell walls, is an abundant renewable material that is currently underutilized — less than 2% is converted into useful products annually. Microorganisms that live inside plants (endophytes) are emerging as promising agents for breaking lignin down into valuable chemicals, offering a greener alternative to energy-intensive chemical methods. This review surveys the current state of endophyte-based lignin degradation and the molecular pathways involved, while comparing biological and thermochemical approaches.

PubMed

Dynamics of nitration during dark-induced leaf senescence in Arabidopsis reveals proteins modified by tryptophan nitration.

2022

Journal of experimental botany

Arasimowicz-Jelonek M, Jagodzik P, Płóciennik A, Sobieszczuk-Nowicka E, Mattoo A +2 more

Plain English
This study examined how nitric oxide chemistry changes during leaf aging in Arabidopsis, finding that a reactive molecule called peroxynitrite spikes transiently early in the process. Rather than triggering the expected protein modifications at tryptophan sites, the peroxynitrite pulse depleted existing modified proteins, while modifications at tyrosine sites increased and nucleic acid damage accumulated as senescence progressed. The results position peroxynitrite as a regulatory signal during leaf aging that selectively modifies proteins, RNA, and DNA to help coordinate the plant's developmental transition.

PubMed

Unraveling the genetics of polyamine metabolism in barley for senescence-related crop improvement.

2022

International journal of biological macromolecules

Tanwar UK, Stolarska E, Paluch-Lubawa E, Mattoo AK, Arasimowicz-Jelonek M +1 more

Plain English
This study identified and characterized all major polyamine metabolism genes in barley on a genome-wide scale, finding 21 genes distributed across all chromosomes with expression patterns that change across developmental stages and stress conditions. The spermidine/spermine synthase gene family showed the strongest response to induced leaf senescence, suggesting polyamines play a central role in how barley manages leaf aging. The dataset provides a genetic roadmap for targeted breeding strategies aimed at improving stress tolerance and extending productive crop lifespan.

PubMed

Investigation of Photosystem II Functional Size in Higher Plants under Physiological and Stress Conditions Using Radiation Target Analysis and Sucrose Gradient Ultracentrifugation.

2022

Molecules (Basel, Switzerland)

Giardi MT, Antonacci A, Touloupakis E, Mattoo AK

Plain English
This study used radiation inactivation and density gradient centrifugation to measure the functional size of photosystem II — the plant protein complex that splits water using light — in living plant tissues and isolated samples from multiple species. Photosystem II was found to operate as a monomer under normal conditions in living plants, a smaller unit than observed in isolated preparations, while heat and drought stress shifted it toward a larger dimeric form. The findings clarify how the photosystem's physical structure changes under stress, which is relevant for engineering crops with better stress tolerance.

PubMed

Over-expression of GGP1 and GPP genes enhances ascorbate content and nutritional quality of tomato.

2022

Plant physiology and biochemistry : PPB

Koukounaras A, Mellidou I, Patelou E, Kostas S, Shukla V +6 more

Plain English
Researchers engineered tomato plants to overexpress two genes in the vitamin C (ascorbic acid) biosynthesis pathway and found that activating one of them specifically in fruit tissue produced three times more vitamin C than normal plants without affecting fruit appearance or yield. RNA analysis showed that higher vitamin C levels triggered changes in dozens of other genes, including those for cell wall structure, ethylene production, and sugar and pigment metabolism. The results demonstrate a practical approach for biofortifying tomatoes and reveal broader metabolic effects of elevated vitamin C in ripening fruit.

PubMed

Feasibility and Acceptability of mHealth Interventions for Managing Hyperphosphatemia in Patients Undergoing Hemodialysis.

2021

Journal of renal nutrition : the official journal of the Council on Renal Nutrition of the National Kidney Foundation

St-Jules DE, Woolf K, Goldfarb DS, Pompeii ML, Li H +4 more

Plain English
This pilot study tested three smartphone- and tablet-based programs to help kidney dialysis patients manage high phosphorus levels, which is a common and dangerous complication. All three apps were generally well received and most patients completed the six-month study, but self-monitoring rates dropped sharply over time regardless of which program patients used. Self-directed digital tools may work as a supplement to standard dietary counseling but are unlikely to replace more hands-on dietitian support.

PubMed

Pancreas transplantation from hepatitis C viremic donors to uninfected recipients.

2021

American journal of transplantation : official journal of the American Society of Transplantation and the American Society of Transplant Surgeons

Lonze BE, Baptiste G, Ali NM, Dagher NN, Gelb BE +5 more

Plain English
This study reports the first series of pancreas transplants using organs from hepatitis C-infected donors given to recipients without hepatitis C, finding that all recipients cleared the virus quickly with antiviral treatment and had excellent organ function. Donors with hepatitis C had much lower organ utilization rates nationally — only 5% of suitable HCV-positive pancreata were transplanted, compared to 37% of HCV-negative ones. The results show that HCV-positive pancreata are safe to use and could significantly expand the donor pool.

PubMed

A Restriction Endonuclease-Based Assay to Distinguish NANOGP8 Retrogene from Parental NANOG.

2021

Methods in molecular biology (Clifton, N.J.)

Thakur H, Mattoo AR

Plain English
NANOG is a stem cell gene that gets switched back on in cancer cells, and a closely related copy called NANOGP8 is the version primarily active in tumors — but the two are so similar that standard lab tests cannot tell them apart. This study describes a DNA-cutting enzyme assay applied to cell-derived RNA that reliably distinguishes NANOGP8 from NANOG. The method enables researchers to study NANOGP8's specific role in cancer and could support efforts to target it therapeutically.

PubMed

Rhizobial-Host Interactions and Symbiotic Nitrogen Fixation in Legume Crops Toward Agriculture Sustainability.

2021

Frontiers in microbiology

Goyal RK, Mattoo AK, Schmidt MA

Plain English
Legume crops can fix their own nitrogen from the air through a partnership with soil bacteria called rhizobia, reducing the need for chemical fertilizers that contribute to greenhouse gas emissions. This review examines the genetic and environmental factors that determine how efficiently this symbiosis works, highlighting that both the plant's genes and the rhizobial partner's genetics must be matched to local soil microbial communities. Despite the agronomic benefits, improving nitrogen fixation efficiency in legumes has not been a breeding priority and remains an underexploited opportunity.

PubMed

Genomic analysis of the polyamine biosynthesis pathway in duckweed Spirodela polyrhiza L.: presence of the arginine decarboxylase pathway, absence of the ornithine decarboxylase pathway, and response to abiotic stresses.

2021

Planta

Upadhyay RK, Shao J, Mattoo AK

Plain English
This study mapped the complete set of polyamine biosynthesis genes in the aquatic plant duckweed (Spirodela polyrhiza) and found it uses only one of the two pathways common in land plants — the arginine-based route — with no genes for the ornithine-based pathway. One of the two arginine decarboxylase genes resembles bacterial rather than plant versions, suggesting ancient evolutionary origins. All pathway genes respond to salt, acid, and the stress hormone methyl jasmonate, indicating polyamines are important regulators of stress adaptation in this floating aquatic plant.

PubMed

Differential Association of Free, Conjugated, and Bound Forms of Polyamines and Transcript Abundance of Their Biosynthetic and Catabolic Genes During Drought/Salinity Stress in Tomato (L.) Leaves.

2021

Frontiers in plant science

Upadhyay RK, Fatima T, Handa AK, Mattoo AK

Plain English
Tomato plants exposed to drought or salt stress show a coordinated increase in polyamines — small protective molecules — for two to three days before levels crash as stress becomes overwhelming. Spermidine in its free and attached forms was most consistently associated with tolerance to both stresses, while different biosynthesis and breakdown genes were specifically activated by drought versus salt. The findings help explain how tomato manages two major agricultural stresses at the molecular level and identify gene targets for improving stress resilience.

PubMed

Stringent Response in Mycobacteria: From Biology to Therapeutic Potential.

2021

Pathogens (Basel, Switzerland)

Gupta KR, Arora G, Mattoo A, Sajid A

Plain English
Mycobacterium tuberculosis survives for years inside human immune cells partly through a stress response called the stringent response, which is triggered by nutrient deprivation and coordinated by small signaling molecules called alarmones. The Rel protein controls both the production and breakdown of these alarmones and regulates key processes including DNA replication, drug resistance, and biofilm formation. Blocking Rel or mimicking its alarmone products with synthetic analogs is proposed as a strategy for new tuberculosis drugs.

PubMed

Editorial: Ethylene Biology and Beyond: Novel Insights in the Ethylene Pathway and Its Interactions.

2020

Frontiers in plant science

Van Der Straeten D, Kanellis A, Kalaitzis P, Bouzayen M, Chang C +2 more

PubMed

Polyamines and Their Biosynthesis/Catabolism Genes Are Differentially Modulated in Response to Heat Versus Cold Stress in Tomato Leaves (L.).

2020

Cells

Upadhyay RK, Fatima T, Handa AK, Mattoo AK

Plain English
This study measured how heat stress and cold stress differently affect polyamine levels and the genes that make and break down these molecules in tomato leaves. Cold stress increased free and bound forms of the protective polyamines putrescine and spermidine, while heat stress decreased them, with distinct sets of biosynthesis and breakdown genes responding to each type of stress. The results indicate that polyamines play a larger protective role in cold acclimation than in heat stress responses in tomato.

PubMed

Ethylene andModulate Expression ofClass I Small Heat Shock Protein Genes During Tomato Fruit Ripening.

2020

Frontiers in plant science

Upadhyay RK, Tucker ML, Mattoo AK

Plain English
Two small heat shock protein genes in tomato that are normally associated with responding to heat were found to be specifically activated during fruit ripening rather than heat stress. Ethylene, the hormone that drives ripening, actually suppresses both genes, and a key ripening regulator protein also modulates their expression. The finding reveals an unexpected developmental role for heat shock proteins and shows they are under tight hormonal control during the fruit ripening program.

PubMed

Mild Clinical Course of COVID-19 in 3 Patients Receiving Therapeutic Monoclonal Antibodies Targeting C5 Complement for Hematologic Disorders.

2020

The American journal of case reports

Araten DJ, Belmont HM, Schaefer-Cutillo J, Iyengar A, Mattoo A +1 more

Plain English
Three patients on eculizumab or ravulizumab — drugs that block a component of the immune complement system — contracted COVID-19 and all had mild illness. This case series raises the possibility that complement inhibition may blunt the dangerous inflammatory response to SARS-CoV-2, consistent with evidence that complement is activated in COVID-19 lung tissue. The observations support further study of complement-blocking drugs as potential treatments for severe COVID-19.

PubMed

Engineered Ripening-Specific Accumulation of Polyamines Spermidine and Spermine in Tomato Fruit Upregulates Clustered C/D Box snoRNA Gene Transcripts in Concert with Ribosomal RNA Biogenesis in the Red Ripe Fruit.

2020

Plants (Basel, Switzerland)

Shukla V, Fatima T, Goyal RK, Handa AK, Mattoo AK

Plain English
Tomato plants engineered to accumulate high levels of the polyamines spermidine and spermine in their fruit showed increased activity of a cluster of small RNA molecules that guide ribosomal RNA processing, along with broadly elevated ribosome and protein synthesis genes at the ripe stage. A previously uncharacterized family of these small RNAs was identified and mapped to two chromosomes in the tomato genome. The results show that elevated polyamines in ripening fruit stimulate the cellular machinery for making proteins, potentially affecting fruit metabolism and quality.

PubMed

Identification, Phylogeny, and Comparative Expression of the Lipoxygenase Gene Family of the Aquatic Duckweed,, during Growth and in Response to Methyl Jasmonate and Salt.

2020

International journal of molecular sciences

Upadhyay RK, Edelman M, Mattoo AK

Plain English
This study identified nine lipoxygenase genes in the aquatic plant greater duckweed and found that the subfamily linked to production of the plant stress hormone jasmonic acid is unusually large compared to land plants, suggesting the hormone is especially important in this aquatic species. Salt stress rapidly activated several of these genes within six hours, and hormone levels changed as the plant culture aged. The findings reveal how a structurally simple floating plant uses a complex gene family to sense and respond to environmental stress.

PubMed

Nexus Between Spermidine and Floral Organ Identity and Fruit/Seed Set in Tomato.

2019

Frontiers in plant science

Nambeesan SU, Mattoo AK, Handa AK

Plain English
Tomato plants engineered to overexpress a yeast gene for making spermidine under a constitutive promoter developed abnormal flowers and failed to set fruit in some lines. The lines without fruit had lower spermidine levels and a lower ratio of spermidine to putrescine in their flowers, along with reduced expression of genes involved in the plant hormone gibberellin. The study establishes that spermidine and the balance among different polyamines are critical for normal flower development and fruit set, acting through gibberellin signaling.

PubMed

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