Francis C Peterson studies the SR-BI protein, which is found on the surface of cells and is essential for removing cholesterol from the bloodstream. By mapping the three-dimensional structure of SR-BI, he investigates how this protein captures cholesterol-carrying particles, which is important for preventing heart disease. His research also delves into how the protein’s structure, particularly a unique zipper-like arrangement of amino acids, affects its ability to function properly. This knowledge could pave the way for new treatments to combat high cholesterol and related cardiovascular conditions.
Key findings
Discovered that SR-BI forms dimers (pairs) to function effectively in cholesterol uptake.
Identified a crucial zipper-like pattern of amino acids in SR-BI; damage to this pattern impairs its function.
Mapped the exact 3D shape of SR-BI, enhancing understanding of its role in cholesterol management.
Frequently asked questions
Does Dr. Peterson study cholesterol-related conditions?
Yes, he studies the SR-BI protein, which is vital for cholesterol removal and heart health.
What treatments has Dr. Peterson researched?
His research could lead to better treatments for high cholesterol and cardiovascular diseases by understanding the SR-BI protein.
Is Dr. Peterson's work relevant to patients with heart disease?
Absolutely. His findings on the SR-BI protein are crucial for developing strategies to prevent and treat heart disease.
Publications in plain English
Atypical GPCR Activation Resolved by Nanobody Engineering.
2026
bioRxiv : the preprint server for biology
Schlimgen RR, Jenjak SE, De La Sancha A, Darcis J, Billesbølle CB +7 more
Plain English This study focused on understanding how a specific protein, called the ACKR3 receptor, works differently from typical proteins targeted by drugs. Researchers discovered that ACKR3 is activated in an unusual way that doesn't follow the usual rules, finding that changes in the shape of the outer part of the receptor play a key role in its activity. This research reveals new possibilities for designing medications that can better target hard-to-reach proteins in the body.
Who this helps: This helps drug developers and researchers working on new treatments.
Drouillard D, Halyko M, Cinquegrani E, Poimenidou M, Emosivbe M +4 more
Plain English This study focused on a type of blood cancer called acute myeloid leukemia (AML) and how a special version of a protein called CXCL12 (CXCL12-LD) affects the movement of cancer cells. Researchers found that CXCL12-LD, unlike other versions of CXCL12, did not promote movement of AML cells but instead helped pull these cells into the bloodstream more effectively in mice. This is important because it could lead to new treatments that can more effectively target AML cells, potentially improving patient outcomes.
Who this helps: This helps patients with acute myeloid leukemia.
Drouillard D, Halyko M, Cinquegrani E, Poimenidou M, Emosivbe M +4 more
Plain English This study focused on a new version of the CXCL12 protein, called CXCL12-LD, and its effects on acute myeloid leukemia (AML) cells. Researchers found that CXCL12-LD reduced the movement of AML cells compared to normal CXCL12 but increased the internalization of the receptor they target, which could help in moving more leukemia stem cells into the bloodstream in mice. This is important because it suggests a new way to make existing treatments more effective by better targeting cancer cells and addressing their resistance to current therapies.
Who this helps: This helps patients with acute myeloid leukemia by potentially improving treatment outcomes.
Encoding and decoding selectivity and promiscuity in the human chemokine-GPCR interaction network.
2025
Cell
Kleist AB, Szpakowska M, Talbot LJ, Slodkowicz G, Malinverni D +12 more
Plain English This study looked at how certain proteins, called chemokines, interact with cell surface receptors to guide cell movement in the body. Researchers found that these interactions can be both specific and broad, depending on shared and unique features of the proteins involved. They identified key elements that determine how these proteins recognize each other, which could help create new treatments for diseases.
Who this helps: This helps patients needing better immune therapies and cell treatments.
Biosafety assessment of engineered CCL20 locked dimers in vivo.
2025
Cell biology and toxicology
Drouillard D, Poimenidou M, Davies M, McAllister D, Clarke WR +4 more
Plain English In this study, researchers looked at a new treatment called CCL20LD, designed to target a specific protein involved in immune response without causing unwanted side effects. They found that giving this treatment daily for 14 days did not lead to weight loss or immune issues, and only caused minor effects on certain immune responses at higher doses. This is important because it shows that CCL20LD could be a safe option for treating diseases related to the CCL20-CCR6 pathway, such as psoriasis or psoriatic arthritis.
Who this helps: This helps patients with psoriasis and psoriatic arthritis.
An orthogonalized PYR1-based CID module with reprogrammable ligand-binding specificity.
2024
Nature chemical biology
Park SY, Qiu J, Wei S, Peterson FC, Beltrán J +8 more
Plain English This study focused on a unique plant system that helps them detect a hormone called abscisic acid (ABA). Researchers developed a new module that improves how plants sense certain chemicals, showing that their system can detect low levels of harmful pesticides with great accuracy. Specifically, the new system can sense these chemicals at levels as low as nanomolar, which is very sensitive. This advancement is important because it could allow for better monitoring of harmful substances in the environment and support the development of new biosensors for agriculture.
Who this helps: This benefits farmers and environmental scientists looking to monitor plant health and pesticide levels.
Plain English This study looked at a special kind of antibody called a nanobody that targets a specific receptor in the body known as ACKR3, which is a type of G protein-coupled receptor (GPCR). Researchers found that a unique part of the nanobody, called an extended CDR3 loop, is crucial for it to bind effectively to ACKR3, making it a potential tool for drug development. Understanding how these nanobodies work helps improve the design of new therapies for conditions related to GPCRs, which are important targets for many medications.
Who this helps: This benefits patients needing better treatments for diseases linked to GPCRs.
Chemokine Receptor N-Terminus Charge Dictates Reliance on Post-Translational Modifications for Effective Ligand Capture and Following Boosting by Defense Peptides.
2024
International journal of molecular sciences
Xu T, Schou AS, Lackman JJ, Barrio-Calvo M, Verhallen L +6 more
Plain English This study looked at two proteins, CCR1 and CCR5, and how they react to certain signals called ligands. The researchers found that CCR5 needs specific modifications (called O-glycosylation) to effectively respond to these signals, while CCR1 does not. When they adjusted the acidity of CCR5, it became less reliant on these modifications, and adding certain basic peptides made the responses even stronger. This research is important because it helps us understand how these receptors work, which can lead to better treatments for conditions where these proteins play a role, such as in inflammation and immune responses.
Who this helps: This benefits patients with immune-related conditions.
Discovery of Selective Cyclic d-Sulfopeptide Ligands of the Chemokine CCL22 via Mirror-Image mRNA Display with Genetic Reprogramming.
2024
Journal of the American Chemical Society
Zhang BB, Harrison K, Zhong Y, Maxwell JWC, Ford DJ +8 more
Plain English The researchers studied a specific protein called CCL22, which is linked to inflammatory conditions like eczema and asthma. They developed a new type of inhibitor, a cyclic peptide, that can effectively bind to CCL22 and stop its activity, showing strong effectiveness with a measurement known as nanomolar affinity, meaning it works very well even at low concentrations. This is important because it opens up new possibilities for treating inflammatory diseases by targeting CCL22 more precisely.
Who this helps: This helps patients suffering from inflammatory diseases like asthma and eczema.
NMR indicates the N-termini of PSGL1 and CCR7 bind competitively to the chemokine CCL21.
2023
Biochemistry and biophysics reports
Witt RN, Nickel KS, Binns JR, Gray AM, Hintz AM +4 more
Plain English This study looked at how two proteins, PSGL1 and CCR7, interact with a chemokine called CCL21, which helps guide immune cells during immune responses. The researchers found that the parts of PSGL1 and CCR7 that bind with CCL21 overlap, meaning they compete for the same binding spot. Specifically, this competition can affect how immune cells respond to infections and potentially influence cancer spread.
Who this helps: This information benefits researchers studying immune responses and cancer treatment.
Mechanistic Insight into the Suppression of Polyglutamine Aggregation by SRCP1.
2023
ACS chemical biology
Haver HN, Wedemeyer M, Butcher E, Peterson FC, Volkman BF +1 more
Plain English This study focused on a protein called SRCP1, which helps prevent the harmful clumping of proteins that can lead to certain diseases like Huntington's disease. The researchers found that SRCP1 not only plays a key role in stopping these clumps but also identified specific parts of its structure that are important for this action. They discovered that SRCP1 can effectively inhibit protein aggregation in various situations, potentially leading to new treatments for polyglutamine diseases.
Who this helps: This research benefits patients suffering from polyglutamine diseases, as well as the doctors treating them.
Fragment-based drug discovery of small molecule ligands for the human chemokine CCL28.
2023
SLAS discovery : advancing life sciences R & D
Zhou AL, Jensen DR, Peterson FC, Thomas MA, Schlimgen RR +3 more
Plain English This study focused on developing new drugs that target a specific protein, CCL28, which plays a role in suppressing the immune response in tumors. Researchers screened over 2,600 small chemical compounds and found thirteen that could potentially bind to CCL28, with two of those compounds capable of attaching at the same time. This is important because it may lead to more effective treatments that can enhance the immune response against tumors.
Who this helps: This helps patients with cancer by improving immunotherapy options.
A modified ELISA assay differentiates CCL20 locked dimers from wild-type monomers.
2023
Journal of immunological methods
Wu X, Clarke WR, Koplinski CA, Peterson FC, Dwinell MB +6 more
Plain English This study developed a new test to measure a modified version of a protein called CCL20, which could help treat psoriasis and psoriatic arthritis. The researchers found a specific antibody that can clearly differentiate the modified protein from its natural form, allowing accurate tracking of its levels in the blood of treated mice. This is important because measuring this protein can help scientists understand how well the new treatment works and its potential side effects.
Who this helps: This helps patients with psoriasis and psoriatic arthritis by supporting the development of more effective treatments.
Proceedings of the National Academy of Sciences of the United States of America
Kim DE, Jensen DR, Feldman D, Tischer D, Saleem A +11 more
Plain English This study focused on creating new small beta barrel proteins, which are tiny protein structures known for their diverse functions but challenging to design. Researchers successfully designed several types of these proteins using advanced computer methods, achieving highly stable structures with less than 2.4 angstroms of deviation from their intended models. This is important because it opens up new possibilities for designing proteins that can target specific molecules in medicine and biotechnology.
Who this helps: This benefits researchers and developers working on new therapies and treatments.
The Chemokine, CCL20, and Its Receptor, CCR6, in the Pathogenesis and Treatment of Psoriasis and Psoriatic Arthritis.
2023
Journal of psoriasis and psoriatic arthritis
Shi ZR, Mabuchi T, Riutta SJ, Wu X, Peterson FC +2 more
Plain English This study looked at a protein pair, CCL20 and its receptor CCR6, that helps white blood cells move to areas of inflammation in people with psoriasis and psoriatic arthritis. Researchers reviewed over 70 studies and found that targeting the CCL20-CCR6 pathway has shown promise in experiments with animals, which may lead to new treatments in the future. Understanding this mechanism could also have implications for other autoimmune diseases.
Who this helps: This helps patients with psoriasis, psoriatic arthritis, and potentially other autoimmune conditions.
Fragment-based screening by protein-detected NMR spectroscopy.
2023
Methods in enzymology
Kerber PJ, Nuñez R, Jensen DR, Zhou AL, Peterson FC +3 more
Plain English This study focused on a method called fragment-based drug discovery (FBDD) that helps scientists find small compounds able to attach to specific proteins in the body, which can lead to new medications. The researchers created a detailed process for screening a library of less than 10,000 potential drug compounds, ensuring that proteins remain stable during the testing and using advanced tools for accurate measurements. As a result, they successfully identified new molecules that bind strongly to various target proteins, which can advance the development of targeted therapies.
Who this helps: This benefits researchers and pharmaceutical companies working on new drug developments.
Structural studies of human fission protein FIS1 reveal a dynamic region important for GTPase DRP1 recruitment and mitochondrial fission.
2022
The Journal of biological chemistry
Egner JM, Nolden KA, Harwig MC, Bonate RP, De Anda J +8 more
Plain English This study looked at a protein called FIS1, which helps another protein, DRP1, do its job in dividing mitochondria—the energy-producing parts of cells. The researchers found that a specific part of the FIS1 protein, called the "arm," is crucial for attracting DRP1 to mitochondria; when this arm was removed in experiments, mitochondrial division decreased significantly. Understanding how these proteins work together is important because it could help us learn more about mitochondrial problems in diseases.
Who this helps: This helps scientists and doctors who study mitochondrial diseases and seek new treatments.
Selective Boosting of CCR7-Acting Chemokines; Short Peptides Boost Chemokines with Short Basic Tails, Longer Peptides Boost Chemokines with Long Basic Tails.
2022
International journal of molecular sciences
Brandum EP, Jørgensen AS, Calvo MB, Spiess K, Peterson FC +6 more
Plain English This study looked at how specific parts of a protein called CCR7 and its related chemokines (signaling molecules) affect the behavior of immune cells, particularly how they move to lymph nodes. The researchers discovered that a specific fragment of the CCL21 chemokine (called C21TP) can increase the effectiveness of two related chemokines, CCL19 and CCL21, in activating immune responses. For example, a modified version of CCL19 was found to be 22 times more effective than the original version in activating CCR7 without needing the booster fragment.
Who this helps: This benefits patients by potentially improving immune responses in treatments like vaccines or immunotherapies.
The non-ELR CXC chemokine encoded by human cytomegalovirus UL146 genotype 5 contains a C-terminal β-hairpin and induces neutrophil migration as a selective CXCR2 agonist.
2022
PLoS pathogens
Berg C, Wedemeyer MJ, Melynis M, Schlimgen RR, Hansen LH +5 more
Plain English This study examined different versions of a specific protein made by the human cytomegalovirus (HCMV), focusing on how they interact with immune system cells called neutrophils. Researchers found that one version (vCXCL1GT5) specifically activates a receptor called CXCR2, leading to the movement of neutrophils, just like another version (vCXCL1GT1) does, although vCXCL1GT1 works with two receptors. Understanding these interactions is important because it could help explain why HCMV has so many different types, which is crucial for developing better treatments for infections, especially in patients with weakened immune systems.
Who this helps: This research helps patients with weakened immune systems, such as those with organ transplants or HIV.
Rapid biosensor development using plant hormone receptors as reprogrammable scaffolds.
2022
Nature biotechnology
Beltrán J, Steiner PJ, Bedewitz M, Wei S, Peterson FC +14 more
Plain English This study focused on creating a new type of biosensor using a plant hormone receptor called PYR1, which can be quickly adapted to detect different molecules. Researchers successfully developed 21 sensors that can identify small amounts (from nanomolar to micromolar concentrations) of various compounds, including different cannabinoids and organophosphates. This advancement is important because it allows for the rapid creation of sensitive detection tools for a wide range of biological applications.
Who this helps: This benefits researchers and industries needing efficient testing methods for various substances.
Conformational selection guides β-arrestin recruitment at a biased G protein-coupled receptor.
2022
Science (New York, N.Y.)
Kleist AB, Jenjak S, Sente A, Laskowski LJ, Szpakowska M +12 more
Plain English This study examined how a specific type of receptor in our cells, called the atypical chemokine receptor (ACKR3), recruits a protein known as β-arrestin, which plays a key role in various cellular processes. The researchers found that changes in the receptor's structure—specifically in its binding area for signals and its connection site for β-arrestin—are important for this recruitment. They discovered that certain mutations in the receptor hindered this process, highlighting how these structural changes influence how the receptor works.
Who this helps: This benefits researchers and drug developers working on treatments that target GPCRs, which are crucial for many diseases.
Selective and Cell-Active PBRM1 Bromodomain Inhibitors Discovered through NMR Fragment Screening.
2022
Journal of medicinal chemistry
Shishodia S, Nuñez R, Strohmier BP, Bursch KL, Goetz CJ +10 more
Plain English This study looked at a protein called PBRM1, which plays a role in cancer, especially prostate cancer, where it can help tumors grow by affecting cell movement and immune response. Researchers tested nearly 2,000 small chemical compounds to find ones that specifically target PBRM1 and discovered 17 promising candidates, with the strongest ones being very effective at low concentrations. These new compounds can block PBRM1's activity and slow down the growth of prostate cancer cells that rely on this protein.
Who this helps: Patients with prostate cancer.
Specific binding-induced modulation of the XCL1 metamorphic equilibrium.
2021
Biopolymers
Dishman AF, Peterson FC, Volkman BF
Plain English This study looked at a protein called XCL1, which changes its structure to perform different roles in the immune system, such as fighting infections and cancer. Researchers discovered that a modified version of XCL1 named CC5 can influence which structure is more common; specifically, it boosts the form that helps fight infections while reducing the form that binds to receptors. This finding is important because it could lead to new strategies for developing treatments that target XCL1 to improve immune responses.
Who this helps: This helps patients with infections and cancer by potentially leading to better treatment options.
Evolution of fold switching in a metamorphic protein.
2021
Science (New York, N.Y.)
Dishman AF, Tyler RC, Fox JC, Kleist AB, Prehoda KE +3 more
Plain English This study looked at how a special protein in humans, called XCL1, can change its shape to perform different functions. Researchers found that XCL1 evolved from a simpler version of itself and now can exist in two equally likely shapes. Understanding how XCL1 and similar proteins can switch forms is important because it opens up possibilities for designing new proteins that can be used in treatments or therapies.
Who this helps: This benefits researchers and scientists who are working on drug development and protein engineering.
Targeted biologic inhibition of both tumor cell-intrinsic and intercellular CLPTM1L/CRR9-mediated chemotherapeutic drug resistance.
2021
NPJ precision oncology
Parashar D, Geethadevi A, McAllister D, Ebben J, Peterson FC +7 more
Plain English This study focused on the problem of chemotherapy-resistant ovarian cancer, which often recurs after initial treatment. Researchers found that a protein called CLPTM1L is present in high amounts on ovarian tumor cells and contributes to their resistance to platinum-based drugs. By using targeted therapies to block CLPTM1L, they could make resistant cancer cells respond better to treatment; specifically, they showed that these therapies re-sensitized 80% of the resistant cells to cisplatin, a common chemotherapy drug.
Who this helps: This research benefits ovarian cancer patients who face recurrence and chemotherapy resistance.
Interactions between AMOT PPxY motifs and NEDD4L WW domains function in HIV-1 release.
2021
The Journal of biological chemistry
Rheinemann L, Thompson T, Mercenne G, Paine EL, Peterson FC +4 more
Plain English This research studied how certain proteins in human cells interact with each other to help the HIV virus leave infected cells and spread. The team found that one specific interaction between AMOT and NEDD4L proteins is especially strong, which is crucial for HIV to successfully bud off from the cell, with AMOT PPxY1 binding most effectively to NEDD4L WW3. This understanding is important because it could lead to new treatments targeting these interactions to hinder HIV's ability to infect more cells.
Who this helps: Patients living with HIV.
The dimeric form of CXCL12 binds to atypical chemokine receptor 1.
2021
Science signaling
Gutjahr JC, Crawford KS, Jensen DR, Naik P, Peterson FC +6 more
Plain English This study looked at how a molecule called CXCL12 interacts with different receptors in the body, specifically focusing on its dimeric form, which consists of two linked CXCL12 molecules. Researchers found that the dimeric form of CXCL12 binds strongly to a receptor named ACKR1, while the single (monomeric) form does not bind nearly as effectively. This discovery is important because it shows that the dimeric form of CXCL12 has a unique role in regulating various biological functions, which could impact how the body responds to diseases.
Who this helps: This benefits patients and researchers studying immune responses and cancer treatments.
Click-to-lead design of a picomolar ABA receptor antagonist with potent activity in vivo.
2021
Proceedings of the National Academy of Sciences of the United States of America
Vaidya AS, Peterson FC, Eckhardt J, Xing Z, Park SY +10 more
Plain English Researchers studied a new compound called antabactin (ANT), which blocks the effects of a plant hormone called abscisic acid (ABA) that can inhibit seed germination. They created a large number of variations of a previously known compound and found that ANT works effectively, with a very strong ability to bind to ABA receptors (about 400 to 1,700 picomolar). This is important because ANT can speed up seed germination in crops like tomato and barley, potentially improving agricultural yields by overcoming the limitations caused by ABA.
Who this helps: Farmers and agricultural scientists looking to enhance crop production.
A negative-feedback loop maintains optimal chemokine concentrations for directional cell migration.
2020
Nature cell biology
Lau S, Feitzinger A, Venkiteswaran G, Wang J, Lewellis SW +5 more
Plain English This study looked at how cells, specifically those in the zebrafish, navigate using a chemical attractant called Cxcl12. Researchers found that for the cells to move in the right direction, the concentration of Cxcl12 needed to stay around 3.4 nanomolar, similar to its highest observed level of 12 nanomolar. When the concentration went too high or too low, the cells struggled to migrate efficiently, highlighting the importance of maintaining the right chemical balance for effective movement.
Who this helps: This helps researchers and doctors studying cell movement in various medical conditions and treatments.
Structural Features of an Extended C-Terminal Tail Modulate the Function of the Chemokine CCL21.
2020
Biochemistry
Moussouras NA, Hjortø GM, Peterson FC, Szpakowska M, Chevigné A +3 more
Plain English This study explored how a specific tail portion of the CCL21 protein affects its function in the immune system. Researchers found that parts of this tail, especially residues 92-100, reduced the effectiveness of CCL21 in activating immune cell movement, showing that the tail helps keep the protein in a less active state. Understanding this interaction is important because it aids in grasping how CCL21 works to guide immune cells, which could impact the development of treatments for immune-related conditions.
Who this helps: This helps doctors and researchers working on immune therapies.
The chemokine X-factor: Structure-function analysis of the CXC motif at CXCR4 and ACKR3.
2020
The Journal of biological chemistry
Wedemeyer MJ, Mahn SA, Getschman AE, Crawford KS, Peterson FC +3 more
Plain English This study looked at a specific part (the X factor) of a protein called CXCL12, which plays a role in directing cell movement in the body by binding to certain receptors. Researchers found that removing a key part of this protein, known as Pro-10, reduced its ability to activate the CXCR4 receptor by over 100 times and diminished its effectiveness with another receptor, ACKR3, by nearly 500 times. This matters because understanding how this protein binds to its receptors can help develop better treatments for conditions like cancer and immune diseases.
Who this helps: This research benefits patients with diseases related to cell movement, such as cancer patients or those with immune disorders.
Dynamic control of plant water use using designed ABA receptor agonists.
2019
Science (New York, N.Y.)
Vaidya AS, Helander JDM, Peterson FC, Elzinga D, Dejonghe W +11 more
Plain English Researchers looked at how to help plants, specifically wheat and tomatoes, better handle drought by creating a new chemical called opabactin (OP). They found that OP works significantly better than a natural plant hormone called abscisic acid, being up to seven times better at binding to its target and ten times more effective in live plants. This is important because it could lead to better ways of reducing crop losses in dry conditions, which is crucial as climate change makes drought more common.
Who this helps: Farmers and agricultural scientists.
The Solution Structure of CCL28 Reveals Structural Lability that Does Not Constrain Antifungal Activity.
2018
Journal of molecular biology
Thomas MA, He J, Peterson FC, Huppler AR, Volkman BF
Plain English This study focused on a protein called CCL28, which plays a role in the immune system by helping attract immune cells and fighting off fungal infections, particularly a common fungus known as Candida albicans. The researchers discovered that CCL28 has a unique structure that can change in response to salt and acidity levels in the body, which affects its ability to combat fungi. Specifically, they found that lower acidity actually boosts how well CCL28 can fight against fungi, showing that changing conditions in mucosal areas of the body can enhance its effectiveness.
Who this helps: This helps patients with fungal infections and doctors treating those infections.
Plain English This study focused on developing a new method for screening chemicals that can bind to proteins, using a technique called 2D NMR spectroscopy. Researchers tested 352 different chemical fragments against three proteins, including two well-known targets, and created a new analysis method to better identify which chemicals specifically interacted with those proteins. They found that their new approach, called difference intensity analysis, was effective in distinguishing helpful compounds from those causing unrelated effects, leading to the identification of six promising chemicals that could influence the mitochondrial fission protein Fis1.
Who this helps: This benefits researchers and drug developers looking for new treatments by providing a better way to screen potential drug candidates.
Structural basis for chemokine recognition by a G protein-coupled receptor and implications for receptor activation.
2017
Science signaling
Ziarek JJ, Kleist AB, London N, Raveh B, Montpas N +15 more
Plain English This study focused on how a specific protein, CXCR4, interacts with a signaling molecule called CXCL12, which is important for cell movement in various biological processes. Researchers found that a variant of CXCL12, which exists as a single unit (monomer), triggered normal cell signaling responses similar to the natural form of CXCL12, while the standard dimer form showed a different interaction pattern. Understanding these interactions is crucial for developing new treatments for diseases where cell migration is a factor, such as cancer and immune disorders.
Who this helps: This helps patients dealing with diseases influenced by cell migration, like cancer and immune system disorders.
Structure and Dimerization of IreB, a Negative Regulator of Cephalosporin Resistance in Enterococcus faecalis.
2017
Journal of molecular biology
Hall CL, Lytle BL, Jensen D, Hoff JS, Peterson FC +2 more
Plain English Researchers studied a protein called IreB, which helps Enterococcus faecalis, a common cause of infections in hospitals, resist certain antibiotics called cephalosporins. They discovered that IreB forms pairs (dimers) and that this pairing is essential for its ability to control the bacteria's resistance to these antibiotics—if it can't pair properly, it doesn't work well. This finding is significant because understanding how IreB operates could lead to better treatments for infections that are hard to treat due to antibiotic resistance.
Who this helps: Patients with infections caused by Enterococcus faecalis.
Phillips AJ, Taleski D, Koplinski CA, Getschman AE, Moussouras NA +6 more
Plain English This study looked at how a specific modification, called sulfotyrosine, affects the binding of a protein called CCL21 to a receptor known as CCR7, which is important for immune response and cancer spread. Researchers found that peptides with sulfotyrosine attached showed the strongest binding to CCL21, enhancing the interaction compared to other modifications. This matters because understanding these interactions can help develop new drugs targeting immune responses in diseases like cancer.
Who this helps: This helps patients with cancer and the doctors treating them.
Protein engineering of the chemokine CCL20 prevents psoriasiform dermatitis in an IL-23-dependent murine model.
2017
Proceedings of the National Academy of Sciences of the United States of America
Getschman AE, Imai Y, Larsen O, Peterson FC, Wu X +3 more
Plain English This study explored how a modified version of a protein called CCL20 can help prevent skin inflammation associated with psoriasis in mice. Researchers created a specific variant of CCL20, named CCL20 S64C, which not only connected well with a receptor crucial for T cell movement but also effectively reduced T cell migration to the skin, ultimately stopping inflammation and related markers like IL-17A and IL-22. This is important because it shows promise for developing new treatments for psoriasis by targeting a key pathway in the disease.
Who this helps: This benefits patients with psoriasis and doctors looking for better treatment options.
A Rationally Designed Agonist Defines Subfamily IIIA Abscisic Acid Receptors As Critical Targets for Manipulating Transpiration.
2017
ACS chemical biology
Vaidya AS, Peterson FC, Yarmolinsky D, Merilo E, Verstraeten I +11 more
Plain English This study focused on how a newly designed chemical called cyanabactin can help control the amount of water plants lose through their leaves, a process known as transpiration. Researchers found that cyanabactin effectively activates specific receptors in plants that respond to abscisic acid (ABA), a hormone that regulates this water loss, making this chemical very powerful in reducing water loss in plants. Specifically, cyanabactin reduces stomatal conductance by around 25%, demonstrating its effectiveness in activating ABA-like responses in plants.
Who this helps: This research benefits farmers and agricultural scientists looking to develop drought-resistant crops.
NMR Structure of the C-Terminal Transmembrane Domain of the HDL Receptor, SR-BI, and a Functionally Relevant Leucine Zipper Motif.
2017
Structure (London, England : 1993)
Chadwick AC, Jensen DR, Hanson PJ, Lange PT, Proudfoot SC +3 more
Plain English Researchers mapped the exact 3D shape of a protein called SR-BI that sits on cell surfaces and grabs cholesterol-carrying particles from the blood—a critical step in preventing heart disease. They discovered that SR-BI works by pairing up with itself (forming dimers), and found a specific zipper-like pattern of amino acids that enables this pairing; when this pattern is damaged, the protein can't pair up and stops working. Understanding how this protein's structure lets it function properly could lead to better treatments for high cholesterol and cardiovascular disease.
Examination of Glycosaminoglycan Binding Sites on the XCL1 Dimer.
2016
Biochemistry
Fox JC, Tyler RC, Peterson FC, Dyer DP, Zhang F +3 more
Plain English Researchers studied a version of a protein called XCL1, which can change its shape and has a form that helps block HIV-1 infection. They found that changing specific parts of this protein significantly reduced its ability to bind to important molecules that help it work against HIV-1. Specifically, mutations at positions Arg23 and Arg43 lowered binding by a lot when tested in lab experiments.
Who this helps: This research benefits patients at risk of HIV infection by advancing our understanding of potential treatments.
Binding of Crumbs to the Par-6 CRIB-PDZ Module Is Regulated by Cdc42.
2016
Biochemistry
Whitney DS, Peterson FC, Kittell AW, Egner JM, Prehoda KE +1 more
Plain English This study looked at how a protein called Crumbs interacts with another protein named Par-6, which is important for maintaining the orientation of cells. Researchers found that Crumbs binds to Par-6 more strongly than other similar molecules, with this binding being influenced by another protein called Cdc42. Understanding this relationship matters because it helps clarify how cells maintain their structure, which is critical for many bodily functions.
Who this helps: This helps patients with conditions related to cell structure, like cancer or developmental disorders.
Structure-Based Identification of Novel Ligands Targeting Multiple Sites within a Chemokine-G-Protein-Coupled-Receptor Interface.
2016
Journal of medicinal chemistry
Smith EW, Nevins AM, Qiao Z, Liu Y, Getschman AE +6 more
Plain English This research focused on a protein called CXCL12 and its interaction with a receptor known as CXCR4, which plays a key role in immune responses and cancer spread. The team discovered new small molecules that can bind to specific parts of the CXCL12 protein, with evidence showing that they connect effectively at three different binding sites. This is important because it opens avenues for developing novel treatments for conditions like cancer, where targeting these interactions can improve therapy options.
Who this helps: Patients suffering from cancer and related conditions.
Tyrosine-sulfated V2 peptides inhibit HIV-1 infection via coreceptor mimicry.
2016
EBioMedicine
Cimbro R, Peterson FC, Liu Q, Guzzo C, Zhang P +8 more
Plain English This study investigated how certain modified peptides from the HIV virus can block HIV-1 infection. Researchers found that specially modified peptides from the virus, called tyrosine-sulfated V2 peptides, can mimic another protein that HIV uses to enter human cells. These peptides effectively prevented the virus from infecting cells across various HIV-1 strains, which is important because it opens new avenues for HIV treatments.
Who this helps: This helps patients living with HIV by potentially leading to new treatment options.
Production of Recombinant Chemokines and Validation of Refolding.
2016
Methods in enzymology
Veldkamp CT, Koplinski CA, Jensen DR, Peterson FC, Smits KM +6 more
Plain English This research focused on creating a type of protein called recombinant chemokines, which play important roles in our immune system and various diseases. The researchers developed effective methods to produce these proteins and ensure they remain biologically active. These advancements are crucial because having consistent and reliable chemokines will improve how scientists study immune responses and could lead to better treatments in clinical trials.
Who this helps: This benefits researchers and doctors working on immune-related diseases and therapies.
The aspartate-less receiver (ALR) domains: distribution, structure and function.
2015
PLoS pathogens
Maule AF, Wright DP, Weiner JJ, Han L, Peterson FC +3 more
Plain English This study examined a special type of signaling molecule in bacteria called Aspartate-Less Receiver (ALR) domains, which are missing a specific part usually required for their function. The researchers found that ALRs are more common than previously thought, especially when linked to unique signaling responses, and they discovered that these domains have adapted to regulate signaling in different ways without the usual mechanism. Understanding ALRs can help scientists learn more about how bacteria respond to their environments, which is important for developing new treatments and interventions.
Who this helps: This benefits researchers and healthcare providers working on bacterial infections and treatments.
Crystal Structure and Functional Analyses of the Lectin Domain of Glucosidase II: Insights into Oligomannose Recognition.
2015
Biochemistry
Olson LJ, Orsi R, Peterson FC, Parodi AJ, Kim JJ +2 more
Plain English This study looked at how a protein called Glucosidase II (GII) helps process sugars during protein production in cells. Researchers found that a specific part of GII, known as the MRH domain, affects how GII recognizes and binds to sugar molecules. They discovered that a specific amino acid (Y372) is crucial for GII’s function, as changing it reduces the protein's activity.
Who this helps: This research benefits scientists looking to improve understanding of protein processing, which can impact various medical treatments.
Solution Structure of CCL19 and Identification of Overlapping CCR7 and PSGL-1 Binding Sites.
2015
Biochemistry
Veldkamp CT, Kiermaier E, Gabel-Eissens SJ, Gillitzer ML, Lippner DR +22 more
Plain English This study examined the structure of a protein called CCL19, which helps guide immune cells to specific areas in the body. Researchers found that two proteins, CCR7 and PSGL-1, have overlapping spots where they can attach to CCL19, meaning they compete for binding. Understanding how these proteins interact is important because it could improve how immune cells are recruited, which is vital for fighting infections and diseases.
Who this helps: This benefits patients, particularly those with immune-related conditions.
Engineering Metamorphic Chemokine Lymphotactin/XCL1 into the GAG-Binding, HIV-Inhibitory Dimer Conformation.
2015
ACS chemical biology
Fox JC, Tyler RC, Guzzo C, Tuinstra RL, Peterson FC +2 more
Plain English This study focused on a type of protein called XCL1 and how it can change shape to either help signal cells or bind to materials that block HIV. Researchers created a new version of this protein, called CC5, that stays in one shape, the dimer form, which strongly binds to a substance in the body and effectively blocks HIV infection in cell tests. The dimer form of CC5 was found to bind to heparin and significantly inhibit HIV activity.
Who this helps: This helps patients at risk of HIV and researchers developing antiviral treatments.