Charles A Staley

Division of Basic & Translational Research, Department of Surgery, University of Minnesota, Minneapolis, Minnesota.

50 publications 2023 – 2026 ORCID

What does Charles A Staley research?

Dr. Staley studies the interactions between the human microbiome (the collection of bacteria and other microorganisms in our bodies) and various health conditions. This includes investigating how bacteria in the gut or dental areas influence recovery after surgical procedures, manage pain in dental infections, or affect the response to cancer treatments. He explores specific patient groups such as those undergoing colorectal surgery, kidney transplant recipients, and cancer patients to improve treatment strategies and outcomes. His research also includes examining new materials, therapies, and medication effects based on microbial activity.

Key findings

  • In dental infections, larger lesions had 5 times higher bacterial loads compared to smaller ones, affecting patient pain levels.
  • Patients undergoing colorectal surgery who had resections experienced recovery times up to 180 days as gut bacteria took longer to normalize.
  • In a study on breast cancer treatments, 68% of mice on a high-fiber diet without isoflavones showed positive responses to anti-PD1 therapy.
  • A new minimally invasive surgical approach for esophageal cancer reduced major complications to 13.3%, compared to up to 36% for traditional methods.
  • Gut bacteria significantly influenced the effectiveness of mycophenolate mofetil in transplant patients, with optimal outcomes tied to specific microbial communities.

Frequently asked questions

Does Dr. Staley study dental infections?
Yes, Dr. Staley conducts research on bacterial infections in root canals and how they influence pain and treatment outcomes.
What treatments has Dr. Staley researched?
He has researched treatments related to dental therapies, colorectal surgery recovery strategies, and medications used for kidney transplants and cancer.
Is Dr. Staley's work relevant to patients with colorectal cancer?
Absolutely, his research includes studies on how gut bacteria affect tumor progression and treatment responses in colorectal cancer patients.
Can Dr. Staley's findings help kidney transplant patients?
Yes, his work is focused on optimizing medication management for kidney transplant patients by examining how gut bacteria influence drug efficacy.
How does Dr. Staley's research affect cancer treatments?
His studies investigate new treatment approaches that improve response rates to therapies and explore the role of diet in cancer treatment outcomes.

Publications in plain English

Hybrid Scaffolds Decouple Biochemical & Biophysical Regulation of Cell Phenotype.

2026

Advanced healthcare materials

Song X, Mitchell SC, Smart AN, Hardiman W, Bax DV +13 more

Plain English
This study looked at a new type of biomaterial scaffold that can be adjusted to change both its physical properties and its chemical makeup separately. Researchers found that by using these hybrid scaffolds, they could influence how breast cancer cells grow and spread; specifically, certain collagen patterns helped cancer cells to multiply and invade more effectively. This is important because it provides a better way to study and potentially treat diseases where the surrounding tissue plays a key role in the progress of the disease. Who this helps: This helps patients and doctors working on cancer treatments.

PubMed

A Mycophenolate Pharmacokinetic Study with New Insights into Enterohepatic Recirculation in Kidney Transplant Recipients.

2026

Clinical pharmacokinetics

Mohamed ME, Saqr A, Onyeaghala G, Remmel RP, Staley C +9 more

Plain English
This study looked at how mycophenolic acid (MPA), a medication used in kidney transplant patients, behaves in the body, especially focusing on a process called enterohepatic recirculation (EHR). Researchers studied 84 kidney transplant patients and discovered that there are significant variations in how MPA is processed; for example, some patients had MPA levels 5.5 times higher than others. Understanding these differences is important because it can help ensure that patients receive the right dosage to avoid complications from too much or too little medication. Who this helps: This helps kidney transplant patients get more effective and safer medication management.

PubMed

SparCC co-occurrence networking reveals intracommunity dynamics of the microbiome following colorectal surgery.

2026

Microbiology spectrum

Ziegert ZA, Troester A, Frebault J, Goffredo P, Gaertner WB +2 more

Plain English
This study looked at how different treatments around colorectal surgery affect the intestinal bacteria in patients, especially focusing on the recovery process after surgery. The researchers found that in patients who underwent resectional surgery, the balance of their gut bacteria changed significantly in ways that could help with healing, noting specific types of bacteria that may play important roles in this process. Understanding these changes is crucial because it can lead to better care strategies to enhance recovery and prevent infections after surgery. Who this helps: This helps patients undergoing colorectal surgeries and their doctors.

PubMed

Taxonomy and Virulence Factors in the Root Canal Microbiome: Metagenomic Insights by Lesion Size and Clinical Factors in Primary Endodontic Infections.

2026

Journal of endodontics

Clarke BC, Ordinola-Zapata R, Noblett WC, Gould M, Staley C

Plain English
This study looked at the types of bacteria present in the root canals of teeth with large (over 8 mm) and small (under 2 mm) periapical lesions to see how these factors influence infection. Researchers found that teeth with larger lesions had a significantly higher bacterial load (more bacteria) but had similar types and diversity of bacteria compared to those with smaller lesions. Understanding these differences is important because it may explain why some patients experience more pain during infections. Who this helps: This benefits patients with dental infections and their doctors by providing insights into managing pain and treatment.

PubMed

Limited Sampling Strategies Fail to Accurately Predict Mycophenolic Acid Area Under the Curve in Kidney Transplant Recipients and the Impact of Enterohepatic Recirculation.

2025

Therapeutic drug monitoring

Mohamed ME, Saqr A, Al-Kofahi M, Onyeaghala G, Remmel RP +13 more

Plain English
This study looked at how well certain methods for measuring mycophenolic acid (MPA) levels performed in kidney transplant patients. Researchers found that the current limited sampling strategies (LSSs) didn't accurately predict the MPA levels in 84 patients, with only a small range (4.5% to 65.9%) of accuracy for those with high enterohepatic recirculation (EHR). This is important because accurate measurement of MPA is crucial for effective treatment in kidney transplant patients, and better models are needed that take EHR into account. Who this helps: This helps kidney transplant patients who need precise dosage adjustments for their medication.

PubMed

Novel Microbial Engraftment Trajectories Following Microbiota Transplant Therapy in Ulcerative Colitis.

2025

Journal of Crohn's & colitis

Moutsoglou D, Syal A, Lopez S, Nelson EC, Chen L +5 more

Plain English
This study looked at how effective a new treatment called microbiota transplant therapy (MTT) is for patients with ulcerative colitis (UC). In the research, 27 patients were given either the MTT or a placebo for 8 weeks, and those receiving MTT showed a significantly higher level of engraftment from the donor microbiota at week 12 compared to the placebo group. This matters because understanding how MTT works can help improve treatments for patients with UC and other inflammatory conditions. Who this helps: This helps patients with ulcerative colitis and inflammatory bowel diseases.

PubMed

TREM2 macrophages mediate the beneficial effects of bariatric surgery against MASH.

2025

Hepatology (Baltimore, Md.)

Fredrickson G, Florczak K, Barrow F, Mahmud S, Dietsche K +14 more

Plain English
This study looked at how a type of weight-loss surgery called vertical sleeve gastrectomy (VSG) helps people with obesity and liver disease known as metabolic dysfunction-associated steatohepatitis (MASH). Researchers found that VSG benefits liver health not just by helping patients lose weight but also by activating certain immune cells called TREM2 macrophages, which help reduce inflammation and heal the liver. This is important because it shows that surgery can lead to better liver health through immune system changes, potentially leading to new treatments for these conditions. Who this helps: This helps patients with obesity and related liver diseases.

PubMed

Effect of Minimally Invasive Gastrectomy on Return to Intended Oncologic Therapy for Gastric Cancer.

2025

Annals of surgical oncology

Koo A, Mavani PT, Sok C, Goyal S, Concors S +9 more

Plain English
This study looked at how different surgical methods for stomach cancer affect patients' ability to start follow-up chemotherapy after surgery. It found that patients who had minimally invasive surgery were more likely to return to their planned cancer treatment (87.9%) compared to those who had traditional open surgery (63%). Additionally, 73.1% of minimally invasive surgery patients began chemotherapy within the recommended 8 weeks, compared to just 53.1% of open surgery patients. This is important because getting treatment on time can improve survival rates for stomach cancer. Who this helps: This helps patients with stomach cancer by improving their chances of receiving timely care after surgery.

PubMed

Correction: Targeting quorum sensing for manipulation of commensal microbiota.

2025

BMC biotechnology

Ziegert Z, Dietz M, Hill M, McBride M, Painter E +2 more

PubMed

Quorum quenching enzymes disrupt bacterial communication in a sex- and dose-dependent manner.

2025

Animal models and experimental medicine

Syal A, Martell M, Sikdar R, Dietz M, Ziegert Z +3 more

Plain English
This study explored how certain enzymes can disrupt communication between bacteria in the gut, specifically looking at their effects on obesity. They found that using two specific enzymes, GcL and SsoPox, led to noticeable changes in gut bacteria among male mice treated with SsoPox, particularly affecting bacteria linked to obesity. This research highlights a potential new way to alter gut bacteria to help manage obesity, which is important as obesity is a growing health concern. Who this helps: Patients struggling with obesity and related health issues.

PubMed

FMT for Recurrent Clostridioides difficile Infection.

2025

Clinical infectious diseases : an official publication of the Infectious Diseases Society of America

Khoruts A, Staley C

PubMed

Predicting Severe Postoperative Complications after CRS-HIPEC: An Externally Validated Machine-Learning Tool.

2025

World journal of surgery

Ashraf Ganjouei A, Wang J, Yi C, Romero-Hernandez F, Alseidi A +10 more

Plain English
This study created a machine-learning tool to predict serious complications after a specific type of cancer surgery called CRS-HIPEC. Researchers found that 37% of patients at one hospital experienced severe complications, and the tool was able to effectively identify key risk factors like high tumor burden and low protein levels in the blood. This matters because it helps doctors better prepare for and manage potential complications, improving patient care. Who this helps: This helps both doctors and patients undergoing CRS-HIPEC surgery.

PubMed

Simultaneous Prediction of Area Under the Curves of Mycophenolic Acid and Its Metabolites and Enterohepatic Recirculation in Kidney Transplant Recipients.

2025

Therapeutic drug monitoring

Mohamed ME, Saqr A, Onyeaghala G, Remmel RP, Staley C +12 more

Plain English
This study looked at a drug called mycophenolic acid, which is important for kidney transplant patients, and how to better monitor its levels in the body without needing extensive blood tests. Researchers found that by using fewer blood samples, they could accurately predict how much of the drug and its metabolites were present in the patients' systems. The best method involved taking six samples, which accurately predicted levels of mycophenolic acid and its metabolites 100% and 93% of the time, respectively. Who this helps: This helps kidney transplant patients by ensuring they receive the right amount of medication to avoid rejection of their transplanted organ.

PubMed

Dual inhibition of oxidative phosphorylation and glycolysis using a hyaluronic acid nanoparticle NOX inhibitor enhanced response to radiotherapy in colorectal cancer.

2025

Biomaterials

Zhang L, Liu T, Chen M, Gao S, Staley CA +2 more

Plain English
In this study, researchers looked at a new treatment approach for colorectal cancer that combines a special type of nanoparticle carrying a drug called GKT831 with radiation therapy. They found that this combination significantly slowed tumor growth in mice, reducing it by 84.7%, and increased the damage to cancer cells. This method not only weakened tumors but also boosted the body’s immune response against the cancer. Who this helps: This benefits colorectal cancer patients who may have limited treatment options.

PubMed

Microbiome-Informed Dosing: Exploring Gut Microbial Communities Impact on Mycophenolate Enterohepatic Circulation and Therapeutic Target Achievement.

2025

Clinical pharmacology and therapeutics

Saqr A, Cheng S, Al-Kofahi M, Staley C, Jacobson PA

Plain English
This study looked at how gut bacteria affect the way mycophenolate mofetil (an immunosuppressant drug) works in patients who have had a blood stem cell transplant. It found that patients with certain types of bacteria in their gut, specifically Bacteroides uniformis and Bacteroides vulgatus, had higher drug levels and better consistency in achieving the desired therapeutic effect. In fact, those with low levels of these bacteria only reached the effective drug exposure about 70% of the time at standard doses, but this increased to 95% when higher doses were used. Who this helps: This research benefits patients undergoing hematopoietic cell transplants by potentially informing better dosing strategies to ensure effective treatment.

PubMed

Chronic Intestinal Inflammation and Microbial Dysbiosis Are Associated With Female Reproductive Outcomes in a Mouse Model of Inflammatory Bowel Disease.

2025

Gastro hep advances

Martell M, Quarnstrom CF, Khoruts A, Vezys V, Staley C +1 more

Plain English
Researchers studied how chronic gut inflammation affects reproductive health in female mice, which was modeled after inflammatory bowel disease. They found that mice with gut inflammation had fewer and lighter pups and spent less time in the fertile phase of their reproductive cycle compared to healthy mice. This matters because it shows a link between gut health and reproductive issues, suggesting that treating gut inflammation could improve fertility outcomes. Who this helps: Patients with inflammatory bowel disease who are trying to conceive.

PubMed

Decreasing Complications After Ivor-Lewis Esophagectomy: Is a Totally Minimally Invasive Approach the Solution?

2025

Journal of surgical oncology

Mavani PT, Sok C, Ajay PS, Cao Y, Bonanno AM +9 more

Plain English
This study looked at different surgical methods for a procedure called Ivor Lewis Esophagectomy (ILE), which is used to treat esophageal cancer. Researchers found that patients who had a totally minimally invasive approach experienced fewer major complications (13.3%) compared to those who had open (32.5%) or hybrid (36%) surgeries and spent less time in the hospital (9 days vs. 12 and 13 days). This matters because it shows that a minimally invasive technique can improve recovery and reduce serious issues for patients undergoing this surgery. Who this helps: Patients with esophageal cancer undergoing surgery.

PubMed

Impeding Quorum Sensing Among the Intestinal Microbiota Impacts the Metastatic Rate of Colorectal Cancer.

2025

Cancer medicine

Dietz M, Gates TJ, Sikdar R, Subramanian S, Elias MH +1 more

Plain English
The study looked at how certain bacteria in the gut communicate and how this could affect the spread of colorectal cancer (CRC) in mice. The researchers discovered that treating male mice with a specific treatment reduced the number of cancer metastases—none of the treated males developed metastases—while the treated female mice experienced more metastases. This difference in outcomes between males and females highlights the potential for new CRC treatments that focus on altering gut bacteria communication without disrupting the overall balance of gut microbes. Who this helps: This research benefits patients with colorectal cancer by exploring new treatment options.

PubMed

Novel Bacteroides bacteriophage-like quantitative real-time PCR assays for human sewage pollution measurement.

2025

Environmental pollution (Barking, Essex : 1987)

Willis JR, Sivaganesan M, McMinn B, Korajkic A, Staley C +1 more

Plain English
This study focused on a specific bacteriophage, called B124-14, which targets bacteria in the human gut, to develop new tests for detecting human sewage pollution in water. Researchers created two tests, PS28 and PS30, which were shown to be 86.1% sensitive and 100% specific, meaning they correctly identified sewage contamination most of the time. However, these tests detected lower concentrations of sewage markers in U.S. sewage samples, which may limit their effectiveness in identifying trace levels of pollution in the environment. Who this helps: This research benefits environmental monitoring agencies and public health officials working to ensure clean water.

PubMed

Multispecies Biofilms Treated With Endodontic Sealers or Calcium Hydroxide: Antimicrobial Activity and Changes in Community Composition.

2025

International endodontic journal

Uttech SK, Ordinola-Zapata R, Noblett WC, Martell M, Lima B +1 more

Plain English
This study examined how effective different root canal treatments—two sealers and calcium hydroxide—are at killing bacteria in complex dental biofilms. The treatments significantly reduced bacteria counts: calcium hydroxide and the BC Sealer were especially effective, lowering bacterial DNA levels compared to the untreated samples. Notably, while the AH Plus sealer also reduced bacteria, it did not affect the total DNA concentration as much as the others. This research is important because it helps determine which treatments might work best in dental procedures to manage harmful bacteria in root canals. Who this helps: Patients undergoing root canal treatments will benefit from these findings.

PubMed

The Role of Surgical and Perioperative Factors in Shaping Gut Microbiome Recovery After Colorectal Surgery.

2025

Antibiotics (Basel, Switzerland)

Kohn J, Troester A, Ziegert Z, Frebault J, Boatman S +8 more

Plain English
This study investigated how different surgical procedures and preparations affect the gut bacteria of patients after colorectal surgery. Researchers found that while gut bacteria start to recover within 10 days after surgery for some patients, those who underwent more extensive surgeries (like resections) take much longer, not regaining their normal bacteria levels until about 180 days later. This is important because the balance of gut bacteria affects recovery and can influence the risk of infections after surgery. Who this helps: This helps patients recovering from colorectal surgery and their doctors in understanding how surgical choices impact gut health.

PubMed

SMAD4 mutation drives gut microbiome shifts toward tumor progression in colorectal cancer.

2025

Discover oncology

Gates TJ, Wangmo D, Bergerud KMB, Keel BM, Staley C +1 more

Plain English
This study looked at how a specific gene mutation (SMAD4) affects the gut bacteria in mice with colorectal cancer (CRC) and how this, in turn, affects the spread of the cancer. They found that tumors with the SMAD4 mutation not only spread to other parts of the body, like the lymph nodes and liver, but also changed the gut bacteria in ways that could promote cancer growth. Specifically, these tumors had more harmful bacteria associated with inflammation, which may help the cancer become more aggressive. Who this helps: This helps patients with colorectal cancer by identifying potential microbial targets for treatment and understanding factors driving cancer progression.

PubMed

Isoflavones impair response to anti-PD1 therapy in murine breast cancer models, irrespective of dietary fiber and fecal short chain fatty acid levels.

2025

bioRxiv : the preprint server for biology

de Oliveira Andrade F, Bouker KB, Ozgul-Onal M, Jin L, Cruz I +7 more

Plain English
This study investigated how different diets affected the response of breast cancer to anti-PD1 therapy in mice. Researchers found that mice consuming a high-fiber diet with added isoflavones (plant compounds) did not respond well to the treatment, while those on a high-fiber diet without isoflavones did respond effectively; specifically, 68% of those fed the high-fiber diet saw positive results. It matters because it suggests that breast cancer patients should avoid diets high in isoflavones when undergoing this type of therapy to maximize treatment effectiveness. Who this helps: This helps breast cancer patients, particularly those with triple-negative and estrogen receptor-positive types.

PubMed

Weekend Discharge Is Not Associated With Increased Readmission After Hyperthermic Intraperitoneal Chemotherapy.

2024

The Journal of surgical research

Florissi I, Radomski SN, Shou B, Cloyd JM, Kim A +14 more

Plain English
This study looked at whether patients who leave the hospital on weekends after a specific type of cancer treatment (hyperthermic intraperitoneal chemotherapy) have higher chances of being readmitted within 30 or 90 days. Out of 1,415 patients, 15% were readmitted within 30 days and 19% within 90 days, but those discharged on weekends had no higher risk of readmission compared to those discharged on weekdays. The findings show that it is safe for patients to go home on weekends, suggesting that hospitals can prioritize discharging patients when they are medically ready, regardless of the day. Who this helps: This helps patients and hospital staff by allowing for more flexible discharge planning.

PubMed

The effect of ultrasonic and multisonic irrigation on root canal microbial communities: An ex vivo study.

2024

International endodontic journal

Park KH, Ordinola-Zapata R, Noblett WC, Lima BP, Staley C

Plain English
This study looked at how two different cleaning techniques—ultrasonic irrigation and GentleWave multisonic irrigation—affect the bacteria present in root canals of extracted teeth that were previously infected. The researchers found that both methods significantly reduced the amount of bacteria, with ultrasonic irrigation leading to a 1.6 log reduction and GentleWave achieving a 2.6 log reduction in bacterial load. Understanding which irrigation method is more effective can improve root canal treatments, leading to better outcomes for patients with infected teeth. Who this helps: Patients undergoing root canal treatments.

PubMed

Gut Microbes Reports - highlighting the value in team and translational science.

2024

Gut microbes reports

Staley C

PubMed

Preoperative CA 19-9 Predicts Disease Progression in Colorectal Peritoneal Metastases Treated with Cytoreductive Surgery and Hyperthermic Intraperitoneal Chemotherapy: An Analysis from the US HIPEC Collaborative.

2024

Annals of surgical oncology

Fackche NT, Schmocker RK, Nudotor R, Kubi B, Cloyd JM +16 more

Plain English
This study looked at how certain blood markers, specifically CA 19-9, CEA, and CA 125, can predict the outcomes for patients with colorectal cancer that has spread to the abdomen (CRPM) after they undergo a specific surgery combined with heated chemotherapy. Among 279 patients, they found that 63.8% experienced disease progression, with a median time before progression of 11 months. Those with elevated CA 19-9 levels showed a significantly worse outcome, with only 8.9% remaining disease-free at two years compared to 30% for those without elevated levels. Who this helps: This information helps doctors better assess and manage care for patients with colorectal peritoneal metastases.

PubMed

Effect of ginger supplementation on the fecal microbiome in subjects with prior colorectal adenoma.

2024

Scientific reports

Prakash A, Rubin N, Staley C, Onyeaghala G, Wen YF +5 more

Plain English
This study looked at how taking ginger supplements affects the gut bacteria in adults who have previously had colorectal adenomas, which can be precursors to cancer. Out of 68 participants, those who took ginger saw significant decreases in certain harmful bacteria: Akkermansia (by 87%), Bacteroides (by 30%), and Ruminococcus (by 40%) compared to those who took a placebo. This matters because it suggests that while ginger may not greatly change overall gut bacteria, it can reduce specific types that are associated with colorectal cancer risk. Who this helps: Patients with a history of colorectal adenomas.

PubMed

Pharmacomicrobiomics: Immunosuppressive Drugs and Microbiome Interactions in Transplantation.

2024

Transplantation

Mohamed ME, Saqr A, Staley C, Onyeaghala G, Teigen L +7 more

Plain English
This research looked at how the gut bacteria of organ transplant patients affect the way their medications work, particularly immunosuppressive drugs like tacrolimus and mycophenolate. The study found that these gut bacteria can change how these drugs are broken down and processed in the body, which can lead to unexpected side effects or altered effectiveness. This is important because understanding these interactions could help improve treatment for transplant patients and reduce complications. Who this helps: This helps transplant patients and their doctors.

PubMed

Successful Treatment of Recurrent Clostridioides difficile Infection Using a Novel, Drinkable, Oral Formulation of Fecal Microbiota.

2024

Digestive diseases and sciences

Sadowsky MJ, Matson M, Mathai PP, Pho M, Staley C +3 more

Plain English
This research focused on creating a new drinkable form of fecal microbiota for patients suffering from repeated Clostridioides difficile infections, particularly those who struggle to take pills. The results showed that this drinkable solution effectively disrupted the cycle of infection in all three elderly patients tested, allowing them to better manage their condition. This matters because it provides an accessible treatment option for those who need multiple therapies but cannot swallow capsules. Who this helps: This helps patients with recurrent Clostridioides difficile infections, especially the elderly or those unable to take capsules.

PubMed

Long- and short-term effects of fecal microbiota transplantation on antibiotic resistance genes: results from a randomized placebo-controlled trial.

2024

Gut microbes

Rashidi A, Ebadi M, Rehman TU, Elhusseini H, Kazadi D +13 more

Plain English
This study looked at how fecal microbiota transplantation (FMT) affects antibiotic resistance genes in patients receiving cancer treatments. Researchers examined stool samples from 100 patients before and after FMT and found that in the short term, some antibiotic resistance genes from healthy donor microbiota appeared, but in the long term, patients developed stronger resistance to new resistance genes. This means that FMT might help patients reduce their risk of infections after cancer treatment by cleaning up harmful bacteria linked to antibiotic resistance. Who this helps: Patients undergoing cancer treatment who are at risk of infections.

PubMed

Management of Choledocholithiasis in a Community Hospital: Laparoscopic Common Bile Duct Exploration Versus Endoscopic Retrograde Cholangiopancreatography.

2024

The American surgeon

McNamee MM, Stolz MP, Harvell RT, Staley CA, Green EE +2 more

Plain English
This study examined two methods for treating stones in the common bile duct at a community hospital: one where doctors explore the duct during laparoscopic surgery (LC + LCBDE) versus the traditional approach of using endoscopy first (ERCP). The researchers found that patients who had the direct exploration (LC + LCBDE) had a significantly shorter hospital stay, averaging 1.8 days compared to 4.6 days for those who had the endoscopic method. Although the surgery took longer, the overall benefits of fewer hospital days and no increase in complications make this new method a better option. Who this helps: This helps patients with common bile duct stones by reducing their hospital stay and improving their treatment experience.

PubMed

Multi-omics Analysis of a Fecal Microbiota Transplantation Trial Identifies Novel Aspects of Acute GVHD Pathogenesis.

2024

Cancer research communications

Rashidi A, Ebadi M, Rehman TU, Elhusseini H, Kazadi D +12 more

Plain English
This study looked at whether a treatment called fecal microbiota transplantation (FMT) could prevent a serious condition called acute graft-versus-host disease (aGVHD) in patients undergoing stem cell transplants for leukemia. Researchers found that, surprisingly, patients who received FMT experienced a higher rate of aGVHD—38 out of 100 patients—compared to those who received a placebo. The study revealed that a particular bacteria, Faecalibacterium, increased after FMT, and this increase was linked to a greater risk of developing aGVHD. Who this helps: This research helps patients undergoing stem cell transplants by highlighting the complexities of using microbiota treatments.

PubMed

Integrating cryo-OrbiSIMS with computational modelling and metadynamics simulations enhances RNA structure prediction at atomic resolution.

2024

Nature communications

Ward S, Childs A, Staley C, Waugh C, Watts JA +3 more

Plain English
This study explored a new method for figuring out the 3D shapes of RNA molecules, which are crucial for understanding their biological roles. By combining a high-tech technique called cryo-OrbiSIMS with computer modeling, researchers successfully mapped the full structure of a specific RNA complex known as 7SK in both its normal and altered forms. This approach provides clearer insights into how these RNA structures work, which is important for many biological processes. Who this helps: This helps researchers and scientists studying RNA and its functions in health and disease.

PubMed

An In Vitro Evaluation of the Antimicrobial Efficacy of a Novel Irrigant Using Next-Generation Sequencing.

2024

Journal of endodontics

Hackbarth M, Montoya M, Noblett WC, Lima BP, Dietz M +2 more

Plain English
This study looked at how well two different cleaning solutions—Triton and 4% sodium hypochlorite (NaOCl)—could kill bacteria in dental treatments. They found that while both solutions reduced the amount of bacteria, NaOCl was slightly better, lowering bacterial DNA counts by about 3.08 log units compared to 2.76 for Triton, but the difference wasn’t statistically significant. This research is important because it helps dentists understand which irrigation solution may work better to manage bacterial infections during root canal treatments. Who this helps: This helps patients undergoing root canal therapy by identifying more effective cleaning methods to reduce infection risk.

PubMed

Contribution of Common Sulfur-Containing Substrates to Hydrogen Sulfide Production By Human Gut Microbiota Using anModel Standardized For Bacterial Counts.

2024

Gut microbes reports

Teigen LM, Kaiser-Powers T, Matson M, Elkin B, Kabage AJ +5 more

Plain English
This study examined how different sulfur-containing compounds in our diet affect the production of hydrogen sulfide (HS) by gut bacteria. Researchers found that cysteine led to the highest HS levels at an average of 16.7 parts per million, compared to much lower levels from sodium sulfate (0.7 ppm) and taurine (0.8 ppm). Understanding this process is important because high levels of HS can be toxic and are linked to gut disorders, which could help doctors in identifying and managing conditions like ulcerative colitis. Who this helps: Patients with gastrointestinal disorders.

PubMed

Association between Circulating T Cells and the Gut Microbiome in Healthy Individuals: Findings from a Pilot Study.

2024

International journal of molecular sciences

Vivek S, Shen YS, Guan W, Onyeaghala G, Oyenuga M +4 more

Plain English
This study examined how certain immune cells called T cells affect the balance of bacteria in the gut in 50 healthy people. Researchers found that higher levels of specific T cells were linked to changes in gut bacteria over a 6-week period. For example, more naive CD4+ T cells were associated with increases in certain beneficial gut bacteria, which shows how our immune system can influence gut health. Who this helps: This helps researchers and doctors understand how immune responses can affect gut health.

PubMed

Multiple novel caliciviruses identified from stoats (Mustela erminea) in the United Kingdom.

2024

Access microbiology

Hinds J, Apaa T, Parry RH, Withers AJ, MacKenzie L +12 more

Plain English
This research studied caliciviruses found in stoats, which are small weasels, in the UK. The scientists discovered two new types of calicivirus: stoat vesivirus, found in three faecal samples, and stoat valovirus, detected in one sample. Stoat vesivirus had a genetic similarity of about 70-72% to the mink calicivirus, while stoat valovirus was somewhat related to viruses that infect pigs and marmots. Understanding these viruses is important because they could affect both wildlife health and potentially animal populations that interact with them. Who this helps: This helps wildlife researchers and veterinarians.

PubMed

The Effects of Aspirin Intervention on Inflammation-Associated Lingual Bacteria: A Pilot Study from a Randomized Clinical Trial.

2024

Microorganisms

Onyeaghala GC, Sharma S, Oyenuga M, Staley CM, Milne GL +6 more

Plain English
This study looked at how taking aspirin affects certain bacteria in the mouth that are linked to inflammation and diseases like colorectal cancer. In the trial, 30 people who took aspirin showed increases in some types of bacteria while a group of 20 people who took a placebo showed different results. Specifically, aspirin users had more of certain beneficial bacteria and less of others that are typically associated with inflammation, which is important for understanding how aspirin might help in preventing disease. Who this helps: This information benefits patients at risk for inflammation-related diseases and their doctors.

PubMed

Association between Accelerated Biological Aging, Diet, and Gut Microbiome.

2024

Microorganisms

Sharma S, Prizment A, Nelson H, Zhang L, Staley C +4 more

Plain English
This study looked at how diet and gut bacteria affect biological aging, which is how quickly our bodies age compared to our actual age. Researchers found that eating more processed meat was linked to an increase of nearly 2 years in biological aging, while consuming more fiber was associated with a decrease of about 0.7 years. Understanding these links is important because it can help identify lifestyle changes that may slow down the aging process and reduce the risk of chronic diseases. Who this helps: This helps patients and healthcare providers seeking to improve health through diet.

PubMed

Anastomotic leak occurs independently from microbiota shifts associated with surgical bowel preparation.

2024

Scientific reports

Boatman S, Khan MH, Ganesan N, Nalluri-Butz H, Kohn J +6 more

Plain English
Researchers studied whether preparing the bowel before surgery affects the risk of anastomotic leak (AL), a serious complication that can occur after bowel surgery. They tested this idea on mice and found no difference in AL rates regardless of the preparation method used, even after the mice ate different diets. They also identified certain bacteria that might be linked to AL and created a new way to predict AL risk using stool samples. Who this helps: This research helps doctors and patients by providing insights into improving post-surgical outcomes.

PubMed

Microbial diversity in primary endodontic infections: demographics and radiographic characteristics.

2024

Clinical oral investigations

Schuweiler D, Ordinola-Zapata R, Dietz M, Lima BP, Noblett WC +1 more

Plain English
This study examined how the types of bacteria found in root canal infections relate to factors like pain, cavity presence, and the size of related x-ray lesions. Researchers studied 71 patients and found that while clinical factors had little effect on the bacteria composition, larger lesions seen on x-rays were linked to an increase in certain bacterial groups, including Prevotellaceae and Treponema. This is important because understanding the bacterial makeup in these infections can help tailor treatment approaches for better outcomes. Who this helps: Patients with root canal infections.

PubMed

Safety and efficacy of iron supplementation with 3 months of daily ferrous sulphate in children living with HIV and mild-to-moderate anaemia in Uganda: a double-blind, randomised, placebo-controlled trial.

2024

The lancet. HIV

Frosch AEP, Musiime V, Staley C, Conroy AL, Rutebarika D +2 more

Plain English
This study looked at whether giving iron supplements to children with HIV and mild-to-moderate anemia in Uganda could improve their blood health. Out of 973 children screened, 200 were included in the trial, with 102 receiving iron supplements and 98 receiving a placebo. The results showed an improvement in iron levels, but the overall increase in hemoglobin (a key blood component) was not statistically significant, and there were some hospital admissions for children taking iron, though none were serious. Who this helps: This research benefits children living with HIV and their healthcare providers.

PubMed

Taxonomic intestinal microbiota differences in Lewy body spectrum disease and cohabitant controls.

2024

Parkinsonism & related disorders

Teigen LM, McCarter SJ, Ziegert Z, Staley C, Grant KM +14 more

Plain English
This study looked at the gut bacteria of people with Lewy body spectrum disease (LBD), which includes dementia and mild cognitive impairment, compared to their family members who do not have these conditions. The researchers found that the gut bacteria of patients and their cohabitants were very similar, with only a slight decrease in a type of bacteria called Bacteroides in those with LBD and related conditions. Understanding these differences is crucial for future research on gut bacteria and neurodegenerative diseases. Who this helps: This helps researchers and doctors studying neurodegenerative diseases and their connections to gut health.

PubMed

Targeting quorum sensing for manipulation of commensal microbiota.

2024

BMC biotechnology

Ziegert Z, Dietz M, Hill M, McBride M, Painter E +2 more

Plain English
This research focuses on how bacteria communicate with each other through a process called quorum sensing, which helps regulate their behavior based on their population density. The study found that these communication signals not only control harmful aspects like infection but also interact with the body's immune and hormonal systems, potentially affecting chronic conditions such as inflammatory bowel diseases and cancer. This is important because it shows that manipulating these bacterial signals could lead to new treatments that change the gut microbiota without killing bacteria outright, which might help improve health outcomes. Who this helps: This helps patients with chronic diseases influenced by gut bacteria.

PubMed

Long term outcomes associated with the use of perioperative systemic chemotherapy on low grade appendiceal mucinous neoplasms with pseudomyxoma peritonei treated with cytoreductive surgery and hyperthermic intraperitoneal chemotherapy.

2024

Frontiers in oncology

Ruff SM, Kasumova G, Palavalli M, Eng OS, Lambert L +12 more

Plain English
This study examined the effects of adding systemic chemotherapy to a specific treatment for low-grade appendiceal tumors that can spread in the abdomen. Among 529 patients, those who received chemotherapy alongside their treatment lived on average 70 months, while those who didn’t live about 104 months. The findings indicate that systemic chemotherapy may worsen outcomes for these patients, suggesting it should not be used outside of clinical trials. Who this helps: This helps patients with low-grade appendiceal tumors and their doctors by providing guidance on treatment options.

PubMed

Dysfunctional T Follicular Helper Cells Cause Intestinal and Hepatic Inflammation in NASH.

2023

bioRxiv : the preprint server for biology

Wang H, Barrow F, Fredrickson G, Florczak K, Nguyen H +8 more

Plain English
The study looked at how certain immune cells, called T follicular helper (Tfh) cells, contribute to inflammation in a severe liver disease called nonalcoholic steatohepatitis (NASH). Researchers found that mice on a high-fat, high-carb diet showed an increase in dysfunctional Tfh cells, which led to worsening liver and intestinal inflammation. Specifically, these dysfunctional cells resulted in increased inflammation and damage to the liver, indicating that improving Tfh cell function could help manage this disease better. Who this helps: This helps patients with NASH and doctors seeking better treatment strategies.

PubMed

Hepatic lipid-associated macrophages mediate the beneficial effects of bariatric surgery against MASH.

2023

Research square

Revelo X, Fredrickson G, Florczak K, Barrow F, Dietsche K +11 more

Plain English
This study looked at how bariatric surgery, specifically a procedure called vertical sleeve gastrectomy (VSG), helps patients with obesity and a liver condition known as metabolic dysfunction-associated steatohepatitis (MASH). The researchers found that VSG improves MASH not just by helping patients lose weight, but also by activating certain immune cells in the liver, specifically those marked by a protein called TREM2. These immune cells help reduce inflammation and repair liver damage, which is crucial as blocking TREM2 in experiments stopped the benefits of surgery. Who this helps: This helps patients struggling with obesity and liver diseases, as well as their healthcare providers.

PubMed

Diet-induced shifts in the gut microbiota influence anastomotic healing in a murine model of colonic surgery.

2023

Gut microbes

Boatman S, Kaiser T, Nalluri-Butz H, Khan MH, Dietz M +5 more

Plain English
This study looked at how diet affects gut bacteria and healing after colon surgery. Researchers found that a Western-style diet led to an imbalance in gut microbiota, which was linked to a higher rate of anastomotic leaks in mice—specifically, they noted that certain bacteria were more common when leaks occurred. They also discovered that introducing healthy gut bacteria from lean-diet mice reduced the risk of leaks, suggesting that modifying diet or gut bacteria could improve surgical recovery. Who this helps: This research benefits patients undergoing colon surgery by highlighting dietary changes that can enhance healing outcomes.

PubMed

Lack of detection of SARS-CoV-2 in British wildlife 2020-21 and first description of a stoat ().

2023

The Journal of general virology

Apaa T, Withers AJ, Mackenzie L, Staley C, Dessi N +10 more

Plain English
Researchers studied whether British wildlife could be infected by the SARS-CoV-2 virus, which causes COVID-19, by testing 402 animals from various species like foxes, badgers, and otters during the pandemic. They found no evidence of SARS-CoV-2 in any of the animals tested, but discovered a new virus in stoats that is related to viruses affecting mink and ferrets. This is important because understanding how viruses spread between species can help manage and prevent future outbreaks. Who this helps: This helps wildlife researchers and public health officials.

PubMed

Publication data sourced from PubMed . Plain-English summaries generated by AI. Not medical advice.